KEGG   Cyclopterus lumpus (lumpfish): 117732786
Entry
117732786         CDS       T09199                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
  KO
K06245  laminin, beta 4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04512  ECM-receptor interaction
clum04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117732786 (lamb4)
   04518 Integrin signaling
    117732786 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117732786 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB4 LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 117732786
NCBI-ProteinID: XP_034391851
Ensembl: ENSCLMG00005020387
UniProt: A0A8C3ALN7
LinkDB
Position
6:18500..63411
AA seq 1800 aa
MIFILFIVFLPAARLQETQYRQDQCPSGSCNPQLGDLMVGRAPRLSASSTCGLDGPQNYC
IIGYLEEEQKCFTCDSRLPYNHHGNPNSHRIENVITTFDPERKTKWWQSENGFHQVSVQL
DLETVFKFSHLVLTFKSFRPAAMLVERSKDYGRSWKVFRYFAEDCLLSFPSVSNQPANSI
DDIVCDSRYSGSDPSTNGEVVLKALDPIFEIRNPYAPNIQDLITLTNIRVNFTRLFTLGD
ILSRRRRNPQDKYYYALYNMVVRGSCFCHGHASRCTPVDGGRGDVFTQTGMVHGRCVCQH
NTAGENCERCQEFHHDSPWRPAGRNTANTCRRCNCNGHSNSCHFDATRFEATGMQSGGVC
EDCLHDRTGSQCERCRPFLFQDPQRTADDPHACRPCDCNPAGSEGGGLCDALSGTCVCKE
NVEGRHCNQCKYGFFNLRRDDPAGCQVCRCHVLGSVGSCDQLTGSCECVPLASGPLCDRC
LPGFWGLGHSEFRCSACDCDVGGAYSTTCSPEDGQCHCLPNMVGRQCSDPAPRYFLPPLD
YFLYEAELAAPLQRRSSSTPLPPSPSSPSSSSLLDPVVLPQCEKYYREQGYDFKFTNGRV
VLVRRTRHLARRWRRGQQNSLPLDPGYALQIVPRQRKTDQSITWTGLGLVRVLEGAGLRF
TVDNLPSPMDYQLVIRYESESASDWLASVSIVTVSSGSGGCSNDPTGSKSLVLPANSRWG
ILDSAVCLNAGSQYFVDIVFTKQPGSDSLSNSHILVDSMGLIPSTDTVQGFCSQSDSLRL
FRCIGLAVELKPEESLREVCEGLIGSTSARVHNGAVLCRCNVAGSLGPSCSKLGGFCECK
PNVIGRCCDTCAPLTFDLGPDGCKSCECEPRGSVSELCNQVRGQCVCRSEVTGRRCDRCQ
TAFWGFPFCQPCQCNELSEVCDEQTGECLNCREHATGPMCERCVEGYYGNPVSRQPCQPC
LCPGVTNSGRFFATSCQHDPQSLSLTCDCREGHTGPRCNRCSPGFYGDLALPGASCEECP
CNNNINTGDRNSCNSQTGECQRCLYNTTGPQCQDCKPGYYGNALDQDCKECSCDRRGTEV
TQCPLGSPCFCNSRTGQCPCRTGVVGTLCDECVDGYWNLDGASGCQTCSCDSVNSFSNIC
NKVTGHCLCQPEFGGRQCDECGENHFGNPDRQCISCDCNVEGTERPSCDPETGECLCRVG
VSGIFCDECAPGYDLVFPICGECHPCNALWAGDVTDIQRATLRMRTFIPRHADVNMWPGD
SRLQQMLKMHSELDSLANLTGLSPPTLEKLEKLEKLCAKIRKLQDAIDPNVILIDPSALL
NTEMDNIGLEFRKLLNNMKAKRRPNPDDEDEYPDELLAEVQKLHEAFMLDEKRVRNANKA
VEDSMDTRQEVKHKLNMCSSRGDMASLEKVHELSVANLNRMICGGPGLEDCSGCGGALCV
LDLGKNKCGGPNCDGVVRVSQKASGTAERVKEQLITLPSRLQASRNKINDAKQQAQDTKD
QAKDLQDRINNNIDSLSREKNKTNELIQQVKDYLIDEMVPPEDIEKMAQAVLDIQMPRSP
DQIRSMINDINNLLSNTNNSPKTLEHAKTTQNLLQEAQELKERTKNIDVTKISRDIYGAE
KAQDKANNDLDTGSRDKDMAKDQIKDMNDKLDDIETKLMNRRSEDLQDKIKDLKRKTEQN
RETAKNAREAADSALNQTTAPEPKLDDAMKLFELLNQKRSNQIVEDEAGERLRKMMEEAE
KIKEQVENKLLQLQDLEEKIQQLIKNKEDKAAEVSTLLETVDSLRKEISKRAEGYVSCTS
NT seq 5403 nt   +upstreamnt  +downstreamnt
atgatcttcatcctcttcatcgtttttcttccagcagctcgactccaggaaacccagtat
cgccaagaccagtgtcccagtggctcctgtaatccccagctgggtgacttgatggtgggt
cgagcgcctcggctgtcagcctcgtccacctgtggtctggatggtccacagaactactgc
atcattggatacctggaggaggagcaaaaatgcttcacatgtgactctcggctgccatac
aatcaccatggcaaccccaacagccaccgcattgagaatgtcatcacgaccttcgacccc
gagagaaaaacaaagtggtggcagtccgaaaacggatttcatcaagtcagcgtccagctt
gatctggagaccgtgttcaagttcagtcatctggtcctcaccttcaagagtttccgtcca
gcggccatgttagtggagcgatcaaaagattacggacggagctggaaggtttttcggtac
tttgcagaagattgtttgctttcctttccgtctgtttccaatcagccagccaacagcatt
gacgatatcgtctgtgacagcagatactctggatcagatccgtccaccaacggagaggtg
gtgctgaaagctctagatcctatctttgaaataaggaacccgtacgcaccaaacatccaa
gatctgatcaccttaacaaatatccgtgtgaacttcactcgtctcttcacgttgggcgac
attctgagtcgaagacgcaggaaccctcaggacaaatattactacgctctgtacaacatg
gtggtcagagggagctgcttctgtcacggacatgccagcaggtgtacacctgtggacgga
ggacggggggacgtcttcacccagactggcatggttcatggtcggtgtgtttgtcagcac
aatacagccggagagaactgtgagagatgtcaggaatttcaccacgactcaccctggagg
cctgcagggagaaacacagccaacacctgcaggagatgcaactgtaacggtcactcgaac
tcttgtcacttcgacgccactcgttttgaagcgacaggcatgcagagcggtggtgtgtgt
gaagactgcctccatgacaggacggggtctcagtgtgaacgctgtcggccttttctgttt
caagatccacagagaacggcggacgacccgcatgcctgcagaccatgtgactgcaaccca
gcgggttcagagggaggcggtctgtgtgatgctctgagtgggacatgtgtctgtaaagaa
aacgtggaaggtcgacactgtaatcaatgcaaatatggcttcttcaatctgagacgggac
gaccctgccggctgtcaggtgtgcaggtgccatgttttgggaagtgttgggtcatgtgat
cagctgacaggaagttgtgaatgtgtccctttggcaagcggtcctctgtgtgatcgatgt
ctgccaggtttctggggtttgggacactctgagttcagatgttcagcgtgtgactgtgac
gttggaggagcttacagcaccacatgttctccggaggatggacagtgtcactgtttaccc
aacatggtgggtcgacaatgctctgaccccgcccctcgctacttcctgcctccactggac
tacttcctgtacgaggcggagctcgccgctccgctgcagagaagaagctcttctactcct
cttcctccttcaccgtcttctccttcttcttcttctctgttggacccagttgttttacct
cagtgtgagaagtattacagagagcagggttacgactttaagttcaccaacggaagagtc
gttctggttcgtaggactcgacacctcgcccgccggtggagacggggacagcagaacagc
ctccctctggacccgggttacgccctgcagattgttccccgtcaaaggaaaactgatcag
tcgatcacctggaccggcctgggattggtcagagtgttggagggggcagggcttaggttc
actgtggacaacctcccatcaccaatggattatcagctggttattcgttatgagtcagag
tctgcgtctgattggctggcttcagtcagcatcgtcacagtgtcatcaggcagcggcggc
tgcagcaatgacccaacaggaagtaaaagtctggttcttcctgcaaactccaggtggggt
attctggactctgcggtgtgtctgaatgcaggcagtcagtactttgtggacattgtcttt
actaaacagcccggatcagacagcctgtccaactcacacattttggtcgactcgatgggt
ttgatcccgagtaccgatactgtccagggcttctgctcccagagtgactctttacgcctc
tttcgctgcatcggattggctgttgagctcaaaccagaggagtcactgagagaggtctgt
gaggggctcatcgggagtacgtcagcacgagtacacaacggagctgtgttgtgcaggtgt
aatgttgccggatctctcggaccatcttgcagtaaactgggaggtttctgtgaatgtaaa
cccaacgtgattggccgttgctgtgatacctgtgcaccactgacgtttgatttaggaccc
gacggctgtaaatcatgcgaatgtgaacctcgtggttcagtatcagagctttgcaatcag
gtcagaggtcaatgtgtgtgtcgttcagaggtcacgggtcgacgctgtgatcgctgtcag
actgcattctggggattccctttctgtcaaccctgtcaatgtaacgagctgtcggaagtg
tgtgatgaacaaaccggagagtgcctgaactgcagggaacatgccaccggaccaatgtgt
gagaggtgtgtggagggctactatggtaacccggtctccagacagccctgtcagccctgc
ctgtgtcctggagttacaaacagcggacgattctttgccacttcatgccaacacgaccca
caatctctcagtctcacctgtgactgcagggaggggcacacaggtccacgctgcaacaga
tgcagccctggtttctatggcgacctggcgttgccaggcgccagctgtgaggagtgtccc
tgcaacaacaacataaacactggagaccgtaactcatgcaacagccaaacaggagaatgt
cagcgctgtctctacaacacaacgggcccccaatgccaggactgcaaacctgggtactac
gggaacgccctggaccaggactgcaaagagtgctcttgtgaccggcgggggacagaggtg
actcagtgtcctctagggagtccttgtttctgtaattcaaggacgggacagtgtccctgc
aggacgggggtggtaggcaccctttgtgacgagtgtgtggacggatattggaacctggac
ggtgcatcggggtgtcaaacctgcagctgtgattctgtgaactccttctccaacatctgc
aacaaggtgacgggacactgtctgtgtcaacctgagtttggaggaagacagtgtgacgaa
tgtggagaaaatcattttgggaatccggaccggcagtgcatctcttgtgactgtaatgtt
gaggggactgagcgcccgtcatgtgatcctgaaaccggtgagtgtctctgccgggtcggc
gtttccgggattttctgtgatgagtgcgcccctggatatgatttggtgttcccgatctgc
ggcgagtgccatccatgcaacgctctctgggctggagacgtcaccgatatccagcgagcc
accttgaggatgagaaccttcattcctcgccacgccgatgtcaacatgtggcccggcgac
agtcgcctgcaacagatgttgaagatgcactccgagttggacagcctcgccaacctgacg
ggactctccccgccaacgctggagaagctggagaagctggagaaactgtgtgcaaagatc
aggaagctgcaagatgccatcgacccaaatgttatcctgatcgatccgtctgctctccta
aacactgaaatggacaacattggtctggagttcagaaagctgctgaacaacatgaaggca
aaacgtcggccgaatccagacgatgaagatgaatacccagacgagctgctggctgaagtc
cagaagcttcatgaagccttcatgttggacgagaagagagtgagaaacgccaacaaagct
gtggaggactccatggacaccaggcaggaagtcaaacataaactgaacatgtgcagcagc
agaggagacatggcgtcgctggagaaggtccatgagctcagtgtggccaatctcaaccga
atgatctgcggaggacccggtctagaggactgctcaggatgtggtggagctctgtgtgtt
ctggatttgggaaaaaataaatgtggaggtccaaactgtgatggagtcgttcgagttagt
cagaaagcttcagggacagcagagagagtgaaggagcaactcatcacacttccatcccgt
ctgcaggcgtccaggaacaagatcaacgatgccaaacaacaagctcaggacaccaaagac
caggccaaagacctccaggaccggatcaacaacaacattgactccctcagcagagagaaa
aataaaaccaatgagctcatccagcaagtcaaagactacctcatagatgagatggttcct
ccagaggacattgagaaaatggcccaagctgttctggacatccagatgccacgatcacca
gatcagatccgatcaatgatcaatgacatcaataatctgctgtccaacacaaacaattcc
cccaaaaccctggagcacgccaagactacccagaacctgctgcaggaagctcaggaactc
aaggagcggacaaagaacattgatgtgaccaagatcagcagagatatttatggagcagag
aaagctcaggacaaagccaacaacgacctggacaccggcagccgagacaaagacatggcc
aaagaccaaatcaaagacatgaacgacaaactagacgacattgagacaaagctgatgaat
cgtcgatctgaagatctgcaggacaagatcaaagacctgaagaggaaaactgagcagaac
agagagacagccaaaaatgccagagaggctgcagactctgctttaaaccagactactgcc
ccagaaccaaagctggatgatgcaatgaagctgtttgagcttttaaaccagaaaaggtcc
aatcagatagttgaagatgaagctggagaacgcctgaggaagatgatggaggaggctgag
aaaataaaggaacaggtggagaacaaacttctacagctacaagatctggaggagaagatc
cagcagctgatcaagaataaagaggacaaagcagctgaagtctccacgttgttagaaact
gtggattcacttcgaaaggaaatctccaaacgggccgaaggatacgtcagctgtacttca
tga

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