Cyclopterus lumpus (lumpfish): 117732807
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Entry
117732807 CDS
T09199
Symbol
ptprz1a
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117732807 (ptprz1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117732807 (ptprz1a)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
clum00535
]
117732807 (ptprz1a)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117732807 (ptprz1a)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117732807 (ptprz1a)
Proteoglycans [BR:
clum00535
]
Cell surface proteoglycans
Others
117732807 (ptprz1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
DSPc
Y_phosphatase3
PTP-NADK
PTPlike_phytase
GUN4_N
FCD
Motif
Other DBs
NCBI-GeneID:
117732807
NCBI-ProteinID:
XP_034391880
LinkDB
All DBs
Position
6:2177703..2241672
Genome browser
AA seq
1842 aa
AA seq
DB search
MDTTRCCLLPAALLILMCQQAGGYAYRNQRKFSEDIDWSYAGTLNQNNWAKKFPSCSNAK
QSPINIEEDLAQVKLQYQKLTFEGWESPTSSRTTIKNDGKTVAVDVDGEFYVSGGGLRSK
FKVGRITFHWGRCNASSEGSEHSLDGVKYPLEMQIYCYEEHRFASLEEAMKAGGRVTALA
VLLETSADDNVNFAAIIDGVNSVSRYGKSGAVPPFAPRGLLPNATDKYFIYNGSLTSPPC
SETVEWIVFKSVAAVSDGQLEMFCEVMTMQQAGYVMLMDYLQNNYREQQQFMGQVFSSYT
GTEEVLTPVCSSEPENLQAVPHNLSSLLVTWERPRAVYDGSIEKYSVTYRLAHAESSAPS
TYLTDGDQDVGAMLDDLLANTSYAVQVVAVCTNGLYGRLSDLLAVAMPIHDPENDPDSEE
FDDEDNYEPDPSWNKPVQTEDYDLTWTPTNSPRTTTSGPPRGVTTTTAEPGRRETSTDPV
PPVGSTRYGPVPGGSEETGPRSTSTRPPGVPLATRNTGGFSGNAPFYSTTRRASSTTPLH
PNAETEAGGLIPKTKAVAPPTSPTKSISSSGASGTTSTSFVRAETDRGLARPVDEDAAAV
SPGPGGLPEIQTPSTSRPSSSGEAAPRRPTSPGAPHSPSTTTSVQLSGVLLLTTQAMSNG
ERPPVLPSTSSPPCDTADPSTCLHDPSSSSWPALSSSSPDSQHAATASRDPASPSTPTPP
GSSPTPPDSSPPPPPHPPHPLSDWGTVAPGVGFDDSDGDFLSGSSSSSASSGDHSVFSET
PPLSAVPDPPEPAWHPSLSAVSPSLGPTLQPSLLLPGDFFTLAVSGATPGSSRSLSVGSE
DAAGYATAESFLPEVSGDGFPFASDVDPVCGCSLEPTASSSWPHASPHAPLPSSAWDSAG
VELFSSAGFSGVGVDDPPRSLSVAGPPLQSHGIAPTASLLPLARSDPPVSVAATASGGGG
DPGISASGGSSTLQTSALPSPPFTPTPEGRALDTSGGASGSALSPDPPEGVDQEWDGVQA
SASGESAFPHWTKVTSAAPSESGASPDDLDGRSSAFYFDSGSGSAVASEAGGAVATPTAP
AAATPAPPWFPGRGGEEEEEEESGSGLHGESPYDIETSSDFSISERTERESKEEEPVADA
SNSSHESRVGSFRERKAVVPLAVISTLTGLGLLVLIGILVYWRTCFQTAHFYIDDNSSPR
VIAVPPSALTSDEQTSFPVKQFVKHVAELHNTSGFQREFEILKESYEEVQTCTVDMTTDG
SNHPDNKSKNRYSNILAYDHSRVRLSSDKDGKTGDYINANYVDGFKKPRSYIAAQGPLKS
STEDFWKMIWEQNVCVIVMITNLVEKGRRKCDQYWPAEVQEEYGGFLVTLKSSRVLAYYT
QRTFSVRNAHAKKGSQKGRSNERTVTQYHYTQWPDMGVPEFALPLLSFVRKSSGARPDDR
GPVVVHCSAGVGRTGTYVVLDSMLTQMRDESNVNITGFLKHIRTQRNYLVQTEEQYVFIH
DALVEAILSGDTEVAAARLHRYVDELLTPGAAGRTRLDKQFTLVCHSGAKRCDFSAALQD
GNRGKNRKCSAVPDERSRVRLSTAAGETSDYINASYVTGYRQRSEFIITQNPLPGTFKDF
WRMLWDHNAQVVVSLMGTPSVEMPEEEEEEAEEEAELRVVWPRKGQPISYETFTVTQRSE
NHICLTNEDMLVVQDYALEATQDDFVLEVKRYRAPRWPNPDSPISNTFELLNLVKGSAAK
DGPVVVHDDVGGATAATFCALSSLTRQLEAEGSVDVFQVAKLTNLMRPGAFSDIEQYQFL
YKAMLSLIGTQEDEKTLQSSDNNGTIVVGTASTAAESLESLV
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggacactacgcgctgctgtctgctgccggctgcacttctcatcctcatgtgccaacaa
gctggaggatacgcatacaggaatcaacgcaagttctcagaagacatcgactggtcgtac
gcgggaaccctgaatcagaacaactgggccaagaagtttccgtcctgcagcaacgccaag
cagtcccccatcaacatcgaggaggacctggctcaggtgaagctgcagtaccagaagctg
acgttcgagggctgggagagtccgacgagcagcaggacgaccatcaagaacgacggcaag
accgtggcggtcgacgtggacggagagttctacgtgagcggaggcggcctgaggtcaaag
ttcaaggtgggacgtatcaccttccactgggggcgctgcaacgcctcctcagagggctcc
gaacacagtctggatggagtcaaataccctctggagatgcagatctactgttatgaggag
catcgcttcgcctccttagaggaggccatgaaggccggagggagggtcaccgcgctggcc
gtgctgctcgagacgagcgcggacgacaacgtgaacttcgccgccatcatcgacggtgtg
aacagcgtgagcagatacggaaagagcggcgcggtgccgcccttcgccccgcgaggcctc
ctgcccaacgccacggacaaatacttcatctacaacggctcgctgacctcgccgccctgc
agcgagaccgtggagtggatcgtcttcaagagcgtggcggccgtctccgacggacagctg
gagatgttctgcgaggtgatgacgatgcagcaggccggctacgtgatgctgatggactac
ctgcagaacaactacagggagcagcagcagttcatgggccaggtgttctcctcttacacc
ggcaccgaggaggtgctcacgccagtgtgcagctcggaaccggagaacctccaggcggtt
ccccacaacctcagcagcctgctggtgacgtgggagcggcctcgggcggtgtacgacggc
agcatcgagaaatactccgtcacctaccggctggcccacgcggagagctccgccccctct
acgtacctgacggacggggaccaggatgtgggggcgatgctcgacgacctgctggccaac
accagctacgcggtccaggtggtggcggtctgcaccaacggtctgtacgggcgtctgagc
gacctgctggcggtcgccatgccgatccacgaccccgaaaatgatccggattcagaggaa
tttgacgacgaggacaactatgaacccgacccgtcctggaacaaaccggtccagaccgag
gactacgatttgacctggacccccacaaactcaccgaggaccacgacctccggacctccg
cgtggcgtcacgaccacgacggcggaacccggtcggagggaaacctccaccgatccggtt
ccccctgtcggatccacccggtacggtccagtcccgggcggctctgaagagacgggtccc
cgcagtacctccacacggccaccaggcgtcccccttgcaacaagaaacacgggagggttc
agtggcaacgctcctttttactccacgaccagaagagccagctccacgactcctttgcac
cccaacgcggagacggaagccggaggtttgattccaaaaacgaaagctgtggctcctccc
acttctcccactaaaagtatttcttccagcggcgcgagcggcacgacgtcgacgtccttc
gtccgggccgagaccgaccgaggtctggcccgtcccgtggacgaagacgccgccgccgtg
tccccgggacccggaggtcttccagagatccagactccttccacctcccggccttcctcc
tcgggtgaagctgctccacggaggcctacaagtcccggcgcgcctcactctccgtccacc
acgacctccgtccagttgagtggcgttctcttgctgaccacgcaggcgatgtccaacggt
gagcgcccccctgtcctcccctccacctcctcccctccgtgtgacacggcggacccctcc
acctgcttgcatgacccttcctcctcgtcttggcccgcgttgtcctcctcttccccggac
tcccagcatgccgctaccgctagcagagacccggcttctccctcgacccccacgccccct
ggctcctcccccacaccccctgactcctccccccctccccctcctcaccccccccacccc
ctgtctgattggggcactgtcgcccccggtgtcgggttcgacgatagcgacggtgatttc
ttgtccgggtcttcgtcttcgtcggcctcctcaggcgaccactcggtgtttagcgagacc
ccgcctctcagcgcggtgccggatccgcccgaacccgcctggcacccatcgctctcggcg
gtctccccgtctctcggcccgaccctccagccttcgcttctcctccctggcgacttcttc
accctcgccgtctccggcgcgactccgggctcgtcccgttctctctccgtcgggtcggag
gacgccgccgggtacgccacggcggagtctttcctccccgaggtcagcggtgacgggttt
cccttcgccagcgacgtggaccccgtgtgcggctgttccctggagcccacggcgtcctct
tcctggccgcacgcctctcctcacgcccccctgccgtcctcggcctgggactctgccggc
gtggagcttttctctagcgcgggcttctctggtgtcggtgtagacgatcccccgcgctct
ctctctgtggcgggtccgcctcttcaatcccacgggatcgctcccacggcgtccctcctc
ccgctcgcccgcagtgacccgcccgtttctgttgcagccacggcgtctggcggcggcggg
gatcccgggatctccgcatcgggtgggagctccaccctccaaacctccgccctcccttcc
ccacccttcacccccaccccagaaggacgggcgttggacactagcggcggcgcctcgggc
tcggccctgtcccccgaccccccggagggcgtggatcaggagtgggacggggttcaagcc
tcggcctccggagagagcgcgttcccccattggaccaaggtcacgagcgccgccccctcc
gagtccggcgcgtcccccgacgatttggacggacgctcctcggcgttctatttcgatagc
ggcagcggcagcgccgtcgcctcggaggcgggaggcgcggtggcgacgccgaccgctcct
gcggcggcgacgccggctccgccctggtttccgggcagggggggggaggaggaggaggag
gaggagagcggctcggggctacatggcgagagcccgtacgacatcgagacgtcctccgac
ttcagtatctccgagcgcacggaaagggagtcgaaggaggaggagcctgtcgcagacgcc
agcaacagcagccacgagtccagagtgggttccttccgggagaggaaggccgtggtcccc
ctggccgtcatctccaccctcaccggcctcggcctgctggtcctcatcggcatcctggtc
tactggaggacctgttttcagacggctcacttctacatcgacgacaactcatcaccccga
gtcatcgctgtaccgccttctgcattgacatctgacgaacaaacgtctttcccagtgaag
cagtttgtgaaacacgtggccgagctccacaacaccagtggattccaacgagagtttgag
atactgaaggagagttacgaggaggttcagacgtgcacggtggacatgacgaccgacggc
tccaaccatcccgacaacaaaagtaaaaaccgatacagcaacatcctggcctacgaccac
agtcgagtgcgactctcgtcggacaaagacgggaagacgggagattacatcaacgccaac
tacgtggacggtttcaagaagccgcggtcgtacatcgccgctcagggtcctctgaagtcg
agcaccgaggacttctggaagatgatttgggagcaaaacgtctgcgtcatcgttatgatc
accaacctggtggagaagggaagaaggaagtgcgatcagtactggccggcggaggtgcag
gaggagtacggcggcttcctggtgacgctgaagagcagcagggtgctcgcctactacacc
cagaggaccttctccgtgaggaacgcccacgccaagaagggctcccagaaggggcggagc
aacgagcggacggtgactcagtaccattacacccagtggcccgacatgggcgtcccggag
ttcgcgctgccgctgctcagcttcgtccgcaagtcgtccggagccaggccggacgaccgg
gggcccgtggtggtgcactgcagcgccggcgttggccggacgggcacgtacgtggtgctg
gacagcatgctgacgcagatgagggacgaaagcaacgtcaacatcacgggcttcctgaaa
cacatccgcacgcagaggaactacctggttcagacagaggaacagtatgtttttatccac
gacgccttggtggaggccatcttgtccggagacacggaggtggcggcggcccggctgcac
cggtacgtggacgagctgctgaccccgggggctgctgggaggacgcgcctggacaagcag
ttcacgctggtttgtcactccggggcgaagcggtgcgacttctctgcagctctgcaggac
ggcaaccgcggcaagaacaggaagtgctccgcggtgcccgacgagaggtcacgtgtgcgc
ttgtctacggcggcgggggaaacgtccgactacattaacgcatcatacgtcaccggttac
aggcagagaagcgagttcatcattacccagaatcctttgcccggcacctttaaggacttc
tggaggatgctttgggaccacaacgcccaggtcgtcgtgtcgctgatggggacgccgtcg
gtcgagatgcccgaggaggaggaggaggaggcggaggaggaggcggagctacgtgtcgtc
tggccacgtaaagggcagccaatcagctacgagacgttcaccgtcactcagaggagcgag
aaccacatctgtctgacgaacgaggacatgctggtggtccaggactacgcactggaagct
acacaggacgactttgttctggaggtgaagcgctaccgggcccctcgctggcccaatccg
gacagtcccatcagcaacaccttcgagctgctcaacctggtgaaggggagcgccgccaag
gacggccccgtcgtggtccacgatgacgtgggaggagccacggcagccacgttctgcgct
ctgtcgtctctaactcgccagctggaggccgaaggttcggtcgacgtcttccaagtggcc
aagctgacgaacctcatgagaccgggagccttcagcgacattgagcagtaccagttcctg
tacaaagccatgctgagtctcatcgggacgcaggaagatgagaaaaccctccagtcctca
gacaacaacggtaccattgtggtgggaaccgccagcactgctgcagagagcctggaatcc
ctggtgtaa
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