Cyclopterus lumpus (lumpfish): 117732838
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Entry
117732838 CDS
T09199
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10280
F-box and leucine-rich repeat protein 14
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117732838
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117732838
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_RPS2
LRR_At5g56370
F-box
LRR_R13L1-DRL21
LRR_EndoS
LRR_8
SAM_Ste50p
Antiterm
Motif
Other DBs
NCBI-GeneID:
117732838
NCBI-ProteinID:
XP_034391933
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All DBs
Position
6:14894074..14896679
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AA seq
403 aa
AA seq
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MFEMETHISCLFPEILAIIFSYLDVKDKGRVAQVCAAWRDASYHKSVWRGVEAKLHLRRA
NPSLFPSLQTRGIKKVQILSLRRSLSYVIQGMPHIESLNLCGCFNLTDNGLGHAFVQDIP
SLRVLNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLR
SCRHVSDVGIGHLSGMTRSAAEGCLSLEKLTLQDCQKLTDLSLKHVSKGLNKLKVLNLSF
CGGISDAGMIHLSHMTHLCSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKIGDQSL
AYIAQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQ
LTGIDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTESERVR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaatggagacgcatatatcgtgccttttcccggagatcctggccattattttc
agttatctggacgttaaagacaaaggaagagtagcccaagtgtgcgcggcctggagggac
gcgtcctaccacaagtctgtgtggaggggggtggaagccaagctccatctgcggagagcc
aacccgtctctgttccccagtctgcagaccagggggatcaaaaaagttcagattctcagc
ctccggcgaagtctgagctacgtgattcaagggatgccgcacatcgaaagccttaacctg
tgtgggtgtttcaacctcacagacaacggacttggtcatgcctttgtgcaggacatccca
tccctgcgggtgctgaacctcagcctttgtaaacagatcactgactccagcctgggcagg
attgcccagtacctcaaaaacctggaggtgcttgaacttgggggatgcagcaatatcaca
aacaccggcctgttgctcattgcctggggcttgcacagactcaagagcctcaacctgcgc
agctgcaggcatgtgtccgatgtgggcatcggtcacttgtcgggcatgacccgcagcgcg
gcagagggctgcctgtccttggagaagttaaccttgcaggactgccagaagctgactgac
ctttccctgaaacatgtctcaaagggccttaacaagctcaaagtgctcaacctcagcttc
tgcggagggatatcagatgcggggatgatccacctgtcgcacatgacgcacctgtgcagc
ctgaacctgcggtcgtgtgataacatcagtgacacagggataatgcatctggccatgggc
tccctccggctgtctggactcgatgtctccttttgtgacaagattggagaccagagcctg
gcttacatcgcccaggggttgtatcagctcaagtccctctctctttgttcctgccatatc
agcgatgatggcattaacaggatggtacgccagatgcacgaactcaagactctcaacatt
ggacagtgtgtgaggatcacagacaaagggttggagttgatcgctgaccacctgactcag
ctgacagggattgatctgtacggttgtactaagatcaccaagaggggtctagagaggata
acacagctcccgtgccttaaagtgttgaacctgggactgtggcagatgactgagagtgag
agagtgaggtga
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