Cyclopterus lumpus (lumpfish): 117732839
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Entry
117732839 CDS
T09199
Name
(RefSeq) spondin-1-like
KO
K24427
spondin-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117732839
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Thrombospondin domain-containing proteins
F-spondins
117732839
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
Spond_N
TSP1_spondin
Reeler
TSP1_CCN
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
117732839
NCBI-ProteinID:
XP_034391934
Ensembl:
ENSCLMG00005011815
LinkDB
All DBs
Position
6:complement(22291355..22372719)
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AA seq
810 aa
AA seq
DB search
MGMYLHVQFLLCFFFSSFVCNAVSFLEEPAGGRLDGYCGRILRAQTQGTRRDGHHEFRLR
VEGDPETYLPGSTYRVVLLATSPAYFRGFTLIALKEGREGTTDDDYTGQFQNIDEEETQF
MTNCAPAVTESTPRRRTRIQVFWTAPPTGSGCIILKASIVQKRIIYFQDEGSLTIRLCEK
ERVFGEATEAPAMECCACGTAKYRLTFYGNWSEKVHPKDYPRRANHWSALIGASHSRGYV
LWEYGGYASEGVRQVAEFGSPIKMEEQIRQKGDEVLTVIKTKAQWPAWQPLNLRAAPSAE
FSVDRTRHLMSFLTMLGPSPDWNVGLSGEDLCTKECGWVQRLDTGLIPWDAGTDNGVTYE
SPNKPTIPQEKIRPLTSLDHPQSPFYDPEGGAITPVARLVVERIARKGEQCNVVPDNIDD
IVADIGQEEKEEDDTPETCIYSGWSPWSACSSATCEKGRRMRQRMLKAQLDLSVPCPHTQ
DFQPCMGPGCSIEEPSTCMMSEWISWSACSVSCGMGMRSRERYVKQYPEDGSLCQLQTEE
TEKCVVNDECSPSSCVVTEWAEWDPCSVTCGLGMRRRERMVKMPPVDGSMCKTEVAEVEK
CMMPECHSLPCMLSPWSDWTECSVTCGRGLRTRQRMLKSDPAGCSEELEQTEKCMLPECP
VDCMVSEWSEWSECNKSCGKGHTIRTRMVKLEPQFGGGACPETIQRKKCKIRKCRTKAKE
ERGGGGGGGGGGGGAGGGQRRRRGKQGRDAAAEEQTGCRMRPWTAWTDCTKPCEGGIQER
FMAAKKRAKGALTAGCQDRKEIRACNVHPC
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtacctccacgtgcagtttttgctctgctttttcttctcgagcttcgtgtgc
aacgccgtctccttcttggaggagcccgccggcggcaggttggacggttactgcgggcgg
atcctccgggcgcagacccaggggacccggagggatgggcaccacgagttcaggctcaga
gtggagggggacccggaaacctatctgccgggcagcacctacagagtggtcctcctggca
accagccccgcttatttccggggtttcaccctcatcgcgctgaaggagggcagagagggc
accacggacgacgactacaccggccagttccagaacattgatgaggaggaaacacagttc
atgaccaactgtgcccctgcagtgacggagagtacccctcgcagacgcaccaggatacag
gtcttctggacggcgccacccactgggtctggctgcattatactgaaggccagtattgtc
cagaagagaatcatttatttccaggacgaaggctctctcactattcgtctgtgtgagaaa
gagcgtgtgttcggcgaggccacagaagctcccgcaatggagtgctgcgcctgcggaaca
gccaagtacagactcaccttctacggcaactggtcggagaaagtccaccccaaagactac
ccgagacgagccaaccactggtcggctctgattggtgcgtctcactccagaggctacgtg
ctgtgggagtacgggggctacgccagcgagggcgtccgtcaggtcgctgagttcggctcc
cccatcaagatggaggaacagattcgacagaagggagatgaagtgcttactgtcattaag
actaaggctcagtggccggcatggcagccgctcaacctgcgagcggctccatcagccgag
ttttctgtggaccggacccgtcacctgatgtccttcctcaccatgctggggcccagccca
gactggaatgtagggctgtcaggagaggacctctgcaccaaggagtgtggctgggtccag
aggttggatacgggactcattccctgggatgcaggcactgacaatggtgtcacttatgag
tcaccaaacaagcccacaattcctcaggagaagattcgacccttgaccagtttggaccac
ccccagagcccgttctacgaccccgaaggaggggcaattacccctgtggccaggctggtg
gtggagcgcatcgctagaaagggtgagcagtgcaacgtggtcccggacaacatagacgac
atcgtcgctgatattggacaggaggagaaggaggaagatgacacaccagagacgtgcatc
tactcgggctggtctccctggtcggcctgtagcagcgcgacgtgcgaaaagggccgcagg
atgaggcagaggatgctgaaggcccagctggacctcagcgtgccgtgtccccacacccaa
gatttccagccctgcatggggccgggatgcagcattgaggagccatccacgtgtatgatg
tcggagtggatcagctggtcggcctgcagcgtgtcctgtgggatgggcatgaggtctaga
gagcgctacgtcaaacagtatcccgaggacggctcgctctgccagctccagacggaggag
acggagaagtgtgtcgtcaacgatgaatgctcacccagcagctgcgtggtgaccgagtgg
gctgagtgggacccctgcagcgtcacctgtggcttgggcatgaggagacgcgagcgcatg
gtgaagatgccccctgtggacggatccatgtgcaagaccgaggtggcagaagtggagaaa
tgcatgatgccagaatgtcatagcctcccctgcatgctgtcgccctggtccgactggacc
gagtgcagcgtgacgtgtgggcggggcttgcgaacgcgccagaggatgctgaagtcggat
cccgcggggtgctccgaggagctggagcagacggagaagtgcatgctgcccgaatgcccc
gtcgactgcatggtctccgagtggtccgagtggtccgagtgcaacaagtcctgcggcaaa
ggacacaccattcggacccgtatggtcaaactggagccgcagttcgggggcggggcttgc
cccgagaccatccagaggaagaagtgcaagatcaggaagtgccggacgaaagcgaaggag
gagagaggaggaggaggaggaggaggaggaggcggcggcggtgcaggaggtggacagaga
aggaggcggggcaaacagggaagagacgcggcggccgaggagcagacaggttgcaggatg
cggccgtggaccgcctggacggactgcaccaagccgtgcgaggggggcatccaggagcgc
ttcatggcggcgaagaaaagagccaagggcgccctgacggccggctgccaggaccggaag
gagatccgcgcctgtaacgttcacccctgctag
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