Cyclopterus lumpus (lumpfish): 117732858
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Entry
117732858 CDS
T09199
Symbol
sycp3
Name
(RefSeq) synaptonemal complex protein 3 isoform X1
KO
K19528
synaptonemal complex protein 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117732858 (sycp3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117732858 (sycp3)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117732858 (sycp3)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
117732858 (sycp3)
Cilium and associated proteins [BR:
clum03037
]
Motile cilia and associated proteins
Sperm associated proteins
117732858 (sycp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cor1
Peptidase_C65
DUF4633
Scaffolding_pro
Exonuc_VII_L
Phage_T7_Gp13
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
117732858
NCBI-ProteinID:
XP_034391959
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All DBs
Position
6:1039710..1051578
Genome browser
AA seq
256 aa
AA seq
DB search
MSAGRKVMKKKHPEEKMDKKVFDFITEDEKKELSCSEEEVREVFMSPDETLMVDKSAKKR
PADFEEGEGPTGAVGNEVHSMLEKFGGKQLCAVWLLHEADISKVMQNKKKRLESLTKNYM
KGSQQKLEQLWNSYHGQRQKMTQQYSQQVSSALQQWESEAQRAEEQEEKLNSLFRQQQKI
LQQARVVQNQKLKTVRELYEQFVKNMEDMEKSHDAFLQGAQQELRKEMANLQKKILMDTQ
QQEMATVRKSLHTMLF
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggaagaaaagtgatgaagaaaaaacatccagaagagaaaatggataaaaag
gtttttgattttattaccgaagatgaaaagaaggagttgagctgctcagaggaggaagtc
agagaagtattcatgtctccagatgaaactctgatggtggacaagtcggccaagaagaga
ccagctgactttgaagagggggaggggcctacgggcgccgtgggaaatgaggtccactcc
atgttggagaagttcggaggtaagcagctctgtgcagtctggttgttgcatgaagctgac
atcagcaaggtgatgcagaataagaagaagcgtctggagagtctgaccaagaactacatg
aagggcagccaacagaagctggagcagctgtggaacagctaccacggacagaggcagaag
atgactcagcagtactcccagcaggtgtcctcagcgctgcagcagtgggagtctgaagcc
cagcgagctgaggagcaggaggagaagctcaacagtctgttcaggcagcagcagaagatc
cttcaacaggcccgagtggtccagaaccagaagctgaagaccgtcagagaactctacgag
cagtttgtgaagaacatggaggacatggagaagagccacgacgccttcctgcagggggcg
caacaggagctgaggaaggagatggccaacctgcagaagaagatcctcatggacacccaa
cagcaggaaatggccaccgtccgcaaatcgctgcacacgatgctgttctga
DBGET
integrated database retrieval system
