KEGG   Cyclopterus lumpus (lumpfish): 117732969
Entry
117732969         CDS       T09199                                 
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04145  Phagosome
clum04210  Apoptosis
clum04530  Tight junction
clum04540  Gap junction
clum04814  Motor proteins
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117732969 (tuba1c)
  09143 Cell growth and death
   04210 Apoptosis
    117732969 (tuba1c)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117732969 (tuba1c)
   04540 Gap junction
    117732969 (tuba1c)
  09142 Cell motility
   04814 Motor proteins
    117732969 (tuba1c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117732969 (tuba1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117732969 (tuba1c)
   03036 Chromosome and associated proteins [BR:clum03036]
    117732969 (tuba1c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117732969 (tuba1c)
   04147 Exosome [BR:clum04147]
    117732969 (tuba1c)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117732969 (tuba1c)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117732969 (tuba1c)
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117732969 (tuba1c)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117732969 (tuba1c)
  Exosomal proteins of other body fluids (saliva and urine)
   117732969 (tuba1c)
  Exosomal proteins of colorectal cancer cells
   117732969 (tuba1c)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117732969
NCBI-ProteinID: XP_034392086
LinkDB
Position
7:18277904..18280849
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSYNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctccatccacgttggtcaggctggtgtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
actgttggaggaggagacgattcctacaacaccttcttcagtgagactggagccggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcatcgatgaggtgcgcagt
gggacttaccgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaattacgcccgtggacactacaccatcggcaaggagatcatcgacatagtgctggac
aggatccgcaaactgtcagaccagtgcaccggccttcagggcttcctggtcttccacagc
ttcggcggtggcaccggctctggtttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccacccttgaacactctgactgt
gccttcatggttgataacgaggccatttatgatatctgccgtaggaacctcgatattgag
cgtccctcttacaccaacctgaacaggttgatcagtcagattgtgtcctccattactgct
tcccttcgtttcgatggcgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgccccggtcatctctgctgagaaa
gcttatcatgagcagctctcagtgtcagaaatcaccaacgcctgctttgaaccagctaat
cagttggtgaaatgtgaccctcgccacggtaaatacatggcttgctgccttttgtatcgt
ggtgatgtggtgcccaaagatgtgaatgctgccattgccaccatcaaaaccaagcgctcc
atccagttcgtggactggtgccccactggtttcaaggttggcatcaactatcagccgccc
actgtagtccctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcgacttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgaaggtatggaggagggagagttctctgag
gccagagaggacatggcagccctggagaaggattatgaggaggttggagtcgactctgtt
gagggagagggagaggaagagggagaggaatattaa

DBGET integrated database retrieval system