Cyclopterus lumpus (lumpfish): 117732969
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Entry
117732969 CDS
T09199
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04210
Apoptosis
clum04530
Tight junction
clum04540
Gap junction
clum04814
Motor proteins
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117732969 (tuba1c)
09143 Cell growth and death
04210 Apoptosis
117732969 (tuba1c)
09144 Cellular community - eukaryotes
04530 Tight junction
117732969 (tuba1c)
04540 Gap junction
117732969 (tuba1c)
09142 Cell motility
04814 Motor proteins
117732969 (tuba1c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117732969 (tuba1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117732969 (tuba1c)
03036 Chromosome and associated proteins [BR:
clum03036
]
117732969 (tuba1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117732969 (tuba1c)
04147 Exosome [BR:
clum04147
]
117732969 (tuba1c)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117732969 (tuba1c)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117732969 (tuba1c)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117732969 (tuba1c)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117732969 (tuba1c)
Exosomal proteins of other body fluids (saliva and urine)
117732969 (tuba1c)
Exosomal proteins of colorectal cancer cells
117732969 (tuba1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117732969
NCBI-ProteinID:
XP_034392086
LinkDB
All DBs
Position
7:18277904..18280849
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSYNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccacgttggtcaggctggtgtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
actgttggaggaggagacgattcctacaacaccttcttcagtgagactggagccggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcatcgatgaggtgcgcagt
gggacttaccgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaattacgcccgtggacactacaccatcggcaaggagatcatcgacatagtgctggac
aggatccgcaaactgtcagaccagtgcaccggccttcagggcttcctggtcttccacagc
ttcggcggtggcaccggctctggtttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccacccttgaacactctgactgt
gccttcatggttgataacgaggccatttatgatatctgccgtaggaacctcgatattgag
cgtccctcttacaccaacctgaacaggttgatcagtcagattgtgtcctccattactgct
tcccttcgtttcgatggcgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgccccggtcatctctgctgagaaa
gcttatcatgagcagctctcagtgtcagaaatcaccaacgcctgctttgaaccagctaat
cagttggtgaaatgtgaccctcgccacggtaaatacatggcttgctgccttttgtatcgt
ggtgatgtggtgcccaaagatgtgaatgctgccattgccaccatcaaaaccaagcgctcc
atccagttcgtggactggtgccccactggtttcaaggttggcatcaactatcagccgccc
actgtagtccctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcgacttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgaaggtatggaggagggagagttctctgag
gccagagaggacatggcagccctggagaaggattatgaggaggttggagtcgactctgtt
gagggagagggagaggaagagggagaggaatattaa
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