Cyclopterus lumpus (lumpfish): 117733052
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Entry
117733052 CDS
T09199
Symbol
snx21
Name
(RefSeq) sorting nexin-21 isoform X1
KO
K17932
sorting nexin-21
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117733052 (snx21)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117733052 (snx21)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PX
TPR_12
DUF5954
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
117733052
NCBI-ProteinID:
XP_034392275
Ensembl:
ENSCLMG00005001219
UniProt:
A0A8C2WD86
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Position
7:25757625..25765261
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AA seq
434 aa
AA seq
DB search
MASRLFDRLKRSLFKDGQGAGPEQDAACGQEEEEVFKEEGWEAELEEEEKECVSDRLGGT
LCFDGEGGGEGGGEGGGEGSGLDSDSDFLGESMEEGLSSTDTSPVGVSPLGSSPSFLLTR
QLQDSWRTLRGLGGGSPTSTGRQLADDLLFEVTDASVVQDASSKYVLYTIHVIESGGSDK
TPAVITRRYSDFQQLHAALRRNHGDRMERVCFPRKKLRRNFTAETIAKRSRAFEQYLSHL
CSLSALRGALCVRQFFYLTDLQTGQLLIRVGRYQEALGPLLNAKRLQHKLGWTSDGDGEA
RAPPPASSHWFFTLVGLSSCFQEVDQLEEARDHCDDALRVLTPEAEHRSLPLQDKPHPLI
EKQDVSQQHVDRPHPLLLPLLRAVVRLSWQTGRDKRQWEELLQQLEEQRAGLVDNQPTIK
EFLIKHNLQSEGEA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccggctgttcgaccgtctgaagcgctccttgttcaaagatggtcagggggcg
ggacctgagcaggacgctgcatgtggacaggaggaagaggaggtgtttaaagaggaaggc
tgggaggcggagctggaggaggaggagaaggagtgtgtgagcgatcggcttggtgggacg
ctgtgcttcgacggcgaaggaggaggcgaaggaggaggcgaaggaggaggcgaggggtcg
gggctggacagtgactccgacttcctgggagagtcgatggaggaggggctgagcagcaca
gacaccagtcctgtgggcgtgtccccgctgggctcctccccgtcctttctgctgactcgg
cagcttcaggacagctggaggaccctccgtggtctcgggggaggaagtcccacctcgacc
gggaggcagctggcggacgacttgctgttcgaggtgacggacgccagcgtcgtgcaggac
gcctcctctaaatacgtgctgtacaccatccacgtcattgagtccggcggcagcgacaag
actccggccgtcatcacccgccgatactccgacttccagcagctccacgccgcgctgcgc
cgtaaccacggagaccggatggagcgcgtctgcttcccgcgaaagaagctgcgcaggaac
ttcacggcggagacgatcgccaagcggagccgggcgttcgagcagtacctgtctcacctg
tgttccctgtcggccctgcggggggcgctgtgcgttcgacagttcttctacctgacagac
ctgcagaccggacagctgttaatcagggtgggacgttaccaggaggctttgggtccgctg
ctcaacgccaagagactgcaacacaaactgggctggacgagtgacggtgacggcgaggct
cgggctccgcctccggcctcctcccattggttcttcaccttggtgggtctgtcgagctgt
ttccaggaagtggaccagctggaggaagcccgcgatcactgtgacgacgccctccgtgtc
ctgacccccgaggcggaacacaggtccctccctctccaggataagccccacccactgatc
gaaaagcaggacgtgtcgcagcagcacgtcgacaggccacaccccctcctgttgccattg
ttgcgggcggtggttcggctgtcgtggcagacggggagggacaagcggcagtgggaggag
cttctgcagcagctggaggagcagagggcggggctagtagataatcagccaaccattaaa
gagttcctgatcaaacacaatctgcagagcgagggggaggcctag
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