Cyclopterus lumpus (lumpfish): 117733084
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Entry
117733084 CDS
T09199
Symbol
pou6f1
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733084 (pou6f1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117733084 (pou6f1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Collagen
LRR_EndoS
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117733084
NCBI-ProteinID:
XP_034392328
Ensembl:
ENSCLMG00005019165
LinkDB
All DBs
Position
7:16391533..16403989
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AA seq
660 aa
AA seq
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MKTKTNVRKTVTVVVQRTMNSQDAPAKNAPLTVNEQVIVMSSHETIRVLEVEVDASLPSS
VPDGKSEVKAEEGVARPAGQTEAGSIQDGPTLPQSTGGVAVLSEQQVVSVEVPAPAVQTL
TPAVPVSLSLSQPQAAMPFTVQGCPQVLTQESLATLMTSMMAQTGSLGQPLLIPLSMAGS
IGGQGGLAVLTLPTANIASLPGLTAANTAGNLLKLPFSGLQAATVLNSVQPQLQTNAQTM
FQPQAAVQVTAAAAQTANTVSQSNISLAALQSAGLSINPAIINAASLGTQPQFLSSLTST
PIITNAMSNMAGITSQIITNAQGQIIGTLPLLLNPASLAGAAATPNLQGLQGLQGLQGLQ
GFQGLQSLQGLQGFQGLQGLQSLQGLQGLQGLQGLQGLQVQTVTPQLLVNSQGQIIATVG
NGSAVVTSAAVLPKVAPPPTLTKPITQASVTTVSQSPIVIAPQPSVLKNATTLSSITCGD
IAKVGQLVSKPQQVVSGEEGINLEEIREFAKTFKIRRLSLGLTQTQVGQALTATEGPAYS
QSAICRFEKLDITPKSAQKLKPVLEKWLAEAEHWNQKGQQNLMEFVGGEPSKKRKRRTSF
TPQAIEVLNSYFEKNALPTGQEITEMARELNYDREVVRVWFCNRRQTLKNTSKINVFQVQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaaacgaatgtcaggaaaacagtgactgtggtggtgcagcgaaccatgaac
tcccaggatgcccctgccaaaaatgccccacttacagtcaatgagcaggtcattgtgatg
tccagccatgagactattcgcgtactagaggtagaggtcgatgcatctctgccatcatca
gtgcccgatgggaagagtgaagtcaaagctgaggagggagtggctcggcctgcagggcaa
actgaggctggcagcatacaggacggccccactttgccccagagcactgggggagtagca
gtgctgagtgagcagcaggtggtgtctgtcgaggttcctgcccctgctgtccaaacgctg
actcctgctgttcccgtcagtttgtccctgtcgcagccccaggccgccatgccattcact
gtacaaggctgtccacaggtgctgacccaagaaagtttggccactctgatgactagtatg
atggcccagacgggatctctggggcagcccttgctcatccccctcagtatggcgggctcc
atcggaggccagggaggtctggctgttctcaccttacctaccgccaacatagcttctctc
cccggcctcacagcagccaacacagctggaaaccttctcaaactgcccttttctggcctc
caagctgcgacagtcctgaactctgtccagccccaactgcagacgaacgctcagacgatg
ttccagcctcaagctgccgtgcaggtgacggcggcggcggcccagacggccaatactgtc
tctcagtccaacatatcgttagcagcgctccagtctgcagggctctctatcaaccctgcc
attatcaatgctgcctctttgggaactcagccccagttcctcagttccctcacttccact
cctatcatcactaatgccatgtccaacatggctggcatcaccagccagatcatcacaaat
gctcaaggacagatcataggaaccctccctcttttgttgaacccagcctctctagctgga
gcggctgcgacacccaacctccagggtctccagggtctccagggtctccagggcctccag
ggtttccagggtctccagagtctccagggtctccagggtttccagggtttgcagggtctg
caaagcttgcaaggcctgcaaggtctccaaggtctccagggtctccagggtctccaggtc
cagactgtcaccccacagctgcttgtcaacagccagggccagattattgccacagtcgga
aatggatctgcagttgtaacttctgctgcagttctgcccaaagtggctcctcccccaaca
cttaccaaacctattacacaggcttcagtaacaactgtcagccagtcaccaattgtcatc
gcccctcagccgtctgtactgaagaatgccaccacgctctcctccatcacctgtggagac
atagcaaaagtgggacagcttgtcagcaaaccccagcaggtagtcagcggcgaggagggc
attaatctggaagagattcgagagtttgccaagactttcaagatccgtcggctgtccctg
gggctcactcagacacaagtagggcaggctctcactgcaacggagggtcctgcctacagc
cagtctgccatttgcaggtttgaaaagctggacatcacgcccaagagtgctcagaagttg
aagccggtgttggagaagtggctggctgaggctgagcactggaaccagaaaggccagcag
aatctgatggagtttgttggcggtgaaccatccaaaaaacgcaagcgacgtaccagtttc
accccgcaggcaatagaagttcttaactcctactttgaaaagaacgcattgccaacaggt
caagagattacagaaatggcaagagagctaaactacgaccgagaggttgtgcgagtgtgg
ttctgtaaccggcggcagacgctgaaaaacacaagcaaaatcaatgtcttccaggttcag
taa
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