Cyclopterus lumpus (lumpfish): 117733100
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Entry
117733100 CDS
T09199
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04148
Efferocytosis
clum04218
Cellular senescence
clum04310
Wnt signaling pathway
clum04370
VEGF signaling pathway
clum04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117733100 (nfatc2a)
04370 VEGF signaling pathway
117733100 (nfatc2a)
04020 Calcium signaling pathway
117733100 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117733100 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
117733100 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117733100 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733100 (nfatc2a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117733100 (nfatc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
117733100
NCBI-ProteinID:
XP_034392369
Ensembl:
ENSCLMG00005012539
LinkDB
All DBs
Position
7:17939849..17957273
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AA seq
903 aa
AA seq
DB search
MTSFYDDKDLEEELSRVNCPDEDLEFEYLFEYEPPCSDFAAGDQDDPNLAAHKILSPECE
QAFRLEEASPYGIKSCSPSYSDHNTEVLSGYENQEARHYLDNTRPAGLALSPRIEITPSR
EHYNHGRDSLQNHHLNISPRPTLTVPGHENQSYREPQCLSPASSNSSTSWHSESYSPWAS
PCVSPSSGQNPGDLCPRLQNIHTGSPRTSPGTSPRNSLAEDGCLGTRSPSSKPGSRSTSP
QGKRTYDMYRNPGLVPGHRSRSPSPHSGHEDHNIGAHYTHSSLADAMNGFGTGQPGLVPT
KIVKTSNQVYTLYPENNAEGNYLVSCDEDIKNKPAAEPFFVIPPIWSKPLVSSICSIPVA
SLPPLEWPIPRRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGGHSIVQLHGYRGTE
PLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKVIHGTKVLEIPLEPKNNMRAI
IDCAGILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQHVSLQVASHPIECSQR
SAHELPMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFLEKTQDGQQIWEMEATVDKDK
SQPSMLFVEVPSYRDSSVGHFVKVNFYVINGKRKRSQPQHFSYTPLSSPSIKTEPIDEYD
ADHMGFTVPQILGLSPHSYYHNPRSILHPDNGLVSSMASCQRLSSSIPSQDARFQQQSPA
IVYSRGGKSLSGSPGLYQQTGGLMPDSHRSVLVHTGSPAHSVGPIGAGQHPSIIQFSPTN
HHLLRGGDPQPLTDPQPDDQQVIYCDGYSPQAAAANSPTPPQAQTAVTHPQHYPTVIQQQ
PYVQKEQQKGRAPPGTEDMEAPGDRQRRVTVKEENLDQAYLDDGELNEIISKDLTGVQAS
GQT
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttttacgacgacaaggatttggaggaagagctcagtcgagtcaactgccct
gatgaggatctggagtttgagtacttgtttgaatatgaaccaccttgcagcgactttgct
gcgggagatcaagatgatccaaacctcgcagctcacaaaatcctcagccctgagtgtgag
caggcgttccgtctggaggaggcctccccttacggcatcaagtcctgcagtccctcctac
agtgaccacaacactgaggttctctcaggatatgagaaccaggaggccagacactacctg
gacaatacccggcctgcaggcctggccctgagcccgcggatcgaaatcaccccctcccgt
gagcactacaaccatggtcgggactccctgcagaaccaccacctgaacattagcccaaga
cccaccctcactgtgcctggccatgaaaaccaatcgtaccgtgagcctcagtgcctgagt
cccgccagcagcaactcctccaccagctggcactcggagagttactccccctgggcgtct
ccttgtgtgtcccccagcagcgggcagaaccccggagacctgtgccccaggttacagaac
atccacactggctccccgcgcacctcccctggcacctcccctcgcaacagcctagccgag
gacggctgcctgggaacccgctcgccttcctccaaacctggctcccgctccacctcccca
cagggcaaacgcacctacgacatgtacaggaatcccggcttagtcccagggcaccgctcc
cgcagtccctcccctcacagcggccatgaagatcacaacataggtgcccactatacacac
agcagcctcgctgatgccatgaatggttttggcaccgggcagccaggcctggtgcccact
aaaatagtcaagacgtcgaaccaggtttacactctgtacccagagaacaacgcagaaggg
aactacttggtgtcctgcgacgaggacataaaaaacaaacctgctgcagagccattcttt
gttatccctccaatctggtccaagccgctggtttccagcatctgcagcatccctgtggcg
tctctacccccgctggaatggccgatccccagacgcacagaccagtatgaactccacatt
gaggtgcagcccaaaccccatcacagagctcactatgagaccgagggaagcaggggtgca
gtcaaagcccccacaggaggacattctattgtgcagttacatggctacagaggcacggag
ccactcggcctgcagatcttcattggaacagctgatgagcgcatcctcaagccccacgcc
ttttatcaagtccaccgcatcactggtaaaacggttacaaccaccagctacgagaaggtt
atccacggcaccaaagtccttgagatcccgctggagccaaagaacaacatgagagcaata
atcgactgcgctgggatcctgaagctcaggaacgctgacatcgagctgcggaagggcgag
acggacgtcggtcggaaaaacactcgcgtccgcctcgtgtttcgtgtgcacatacctcag
cctggaggacagcacgtctctctccaagtggcctcgcatcctatcgagtgctcccagcgc
tcggcacatgagcttcccatggtggagaagcaggacatggacagctgctccgttctgggc
ggccagcagatgatcctgactgggcaaaacttcagctccgattccaaggtcatttttttg
gagaaaacccaggatgggcagcaaatctgggaaatggaagcaacggtggacaaagacaag
agccagcccagtatgctgtttgtggaggtgccgtcataccgagactcgtctgtcggccat
tttgtcaaagtcaacttctacgtcattaatggcaagaggaagcgcagccagcctcagcat
ttctcctacacaccactgtcatctccatccatcaagaccgagcccatagatgaatatgac
gcagaccacatgggtttcaccgtgcctcagatcttgggcctatccccccattcctactac
cataacccgcgcagcatccttcatccagacaacggcctggtctccagcatggcctcctgc
cagcgtctcagctccagcattccgagccaagacgcacgtttccagcagcagagcccggcc
atcgtgtactcccgcgggggcaagagtctgagcggcagccccggcctttatcagcagact
ggagggttgatgcccgactcccaccggtcggtcctggtccacacgggctccccggctcac
tctgtaggtcccatcggtgcaggccagcacccttccatcatccagttctctcccaccaac
caccacctgcttcggggaggtgaccctcaacctctcactgatccgcagcccgacgaccag
caggtcatctactgcgatggctactccccacaggcggccgccgccaactcgcccacaccc
ccccaggctcagacagcggtcacccacccacagcactatcccaccgttatccagcagcaa
ccttacgtgcagaaggagcagcagaaaggccgggctccgcctggcacggaggacatggag
gctccgggagacagacagaggagggtgacggtcaaggaggagaacttggaccaggcctac
ctagatgatggtgagttgaatgagatcataagtaaagatctgacgggcgttcaggccagc
gggcagacatag
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