Cyclopterus lumpus (lumpfish): 117733119
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Entry
117733119 CDS
T09199
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04210
Apoptosis
clum04530
Tight junction
clum04540
Gap junction
clum04814
Motor proteins
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117733119
09143 Cell growth and death
04210 Apoptosis
117733119
09144 Cellular community - eukaryotes
04530 Tight junction
117733119
04540 Gap junction
117733119
09142 Cell motility
04814 Motor proteins
117733119
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117733119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117733119
03036 Chromosome and associated proteins [BR:
clum03036
]
117733119
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117733119
04147 Exosome [BR:
clum04147
]
117733119
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117733119
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117733119
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117733119
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117733119
Exosomal proteins of other body fluids (saliva and urine)
117733119
Exosomal proteins of colorectal cancer cells
117733119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117733119
NCBI-ProteinID:
XP_034392403
Ensembl:
ENSCLMG00005017705
LinkDB
All DBs
Position
7:18265129..18268135
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSYNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccacgttggtcaggctggtgtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
actgttggaggaggagacgattcctacaacaccttcttcagtgagactggagccggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcattgatgaggtgcgcagt
ggtatttaccgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaattacgcccgtggacactacaccatcggcaaggagatcatcgacatagtgctggac
aggatccgcaaactgtcggaccagtgcaccggccttcagggcttcctggtcttccacagc
ttcggcggtggcaccggctctggtttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccacccttgaacactctgactgt
gccttcatggtcgataacgaggccatttatgatatctgccgtaggaacctcgatatcgag
cgtccctcttacaccaacctgaacaggttgatcagtcagattgtgtcctccatcactgct
tctcttcgtttcgatggcgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgccccggtcatctcagctgagaaa
gcttaccatgagcagttaacggtgtcagaaatcaccaactcctgttttgaaccagccaat
cagatggtgaaatgtgaccctcgccacggtaaatacatggcttgctgccttttgtatcgt
ggtgacgtggtgcccaaagatgtaaatgctgccattgccaccatcaaaaccaagcgctcc
atccagttcgtggactggtgccccactggtttcaaggttggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcgacttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgaaggtatggaggagggagagttttctgag
gccagagaggacatggcagctctggagaaggattatgaggaggttggagtcgactctgtt
gagggagagggagaggaagagggagaggaatattaa
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