KEGG   Cyclopterus lumpus (lumpfish): 117733122
Entry
117733122         CDS       T09199                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04145  Phagosome
clum04210  Apoptosis
clum04530  Tight junction
clum04540  Gap junction
clum04814  Motor proteins
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117733122
  09143 Cell growth and death
   04210 Apoptosis
    117733122
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117733122
   04540 Gap junction
    117733122
  09142 Cell motility
   04814 Motor proteins
    117733122
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117733122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117733122
   03036 Chromosome and associated proteins [BR:clum03036]
    117733122
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117733122
   04147 Exosome [BR:clum04147]
    117733122
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117733122
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117733122
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117733122
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117733122
  Exosomal proteins of other body fluids (saliva and urine)
   117733122
  Exosomal proteins of colorectal cancer cells
   117733122
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117733122
NCBI-ProteinID: XP_034392406
LinkDB
Position
7:complement(18255931..18258353)
AA seq 450 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSGKTSGGGDDSYNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEVIDIVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLDHSDCAFMVDNEAIFDICRRNLDVERPSYSNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKACHEQLTVSEITNSCFEPAN
QFVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVGDDEEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctgtgcacgtcggccaggccggggtccagattggcaatgcctgc
tgggaactttactgtctggaacatgggatccagccggacgggcagatgcccagcggaaag
acctccggaggaggagacgattcctacaacaccttcttcagtgagactggagccggaaag
cacgtccccagagcagtttttgtggatctggagcccactgtcatcgatgaggtgcgcagt
gggacttaccgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaattacgcccgtggacactacaccatcggcaaagaggtcatcgacatagtgctggac
aggatccgcaaactgtcagaccagtgcaccggccttcagggcttcctggtcttccacagc
ttcggcggtggcaccggctctggtttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccaccctagatcactctgactgt
gccttcatggtcgataacgaggccatcttcgatatctgtcgtaggaaccttgatgttgag
cgtccctcttacagcaatctgaacaggttgatcagtcagattgtgtcctccatcactgct
tcccttcgtttcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgccccggtcatctcagctgagaaa
gcttgccatgagcagttaacggtgtcagaaatcaccaactcctgctttgaaccagccaat
caatttgtaaaatgtgaccctcgccatggtaaatacatggcttgctgccttttgtatcgt
ggtgacgtggtacccaaagatgtgaatgctgccattgccaacatcaaaaccaagcgctcc
atccagttcgtggactggtgccccactggtttcaaggttggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcgacttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgaaggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattatgaagaagttggagcagacagtgta
ggagatgatgaggaagaaggagaagagtattaa

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