Cyclopterus lumpus (lumpfish): 117733123
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Entry
117733123 CDS
T09199
Name
(RefSeq) tubulin alpha-1C chain-like isoform X1
KO
K07374
tubulin alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04210
Apoptosis
clum04530
Tight junction
clum04540
Gap junction
clum04814
Motor proteins
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117733123
09143 Cell growth and death
04210 Apoptosis
117733123
09144 Cellular community - eukaryotes
04530 Tight junction
117733123
04540 Gap junction
117733123
09142 Cell motility
04814 Motor proteins
117733123
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117733123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117733123
03036 Chromosome and associated proteins [BR:
clum03036
]
117733123
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117733123
04147 Exosome [BR:
clum04147
]
117733123
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117733123
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117733123
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117733123
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117733123
Exosomal proteins of other body fluids (saliva and urine)
117733123
Exosomal proteins of colorectal cancer cells
117733123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117733123
NCBI-ProteinID:
XP_034392407
LinkDB
All DBs
Position
7:complement(18261551..18263972)
Genome browser
AA seq
448 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSGKTSGGGDDSYNTFFSETGAGK
HVPRAVFVDLEPTVIGEMRSGTYRQLFHPEQLITGKEDAANNYARGHNTIGKEIIELVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIFDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNSCFEPDN
QFVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADTLGNDEGEEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtgcacgttggccaggccggggtccagattggcaatgcctgc
tgggaactttactgtctggaacatgggatccagccggacgggcagatgcccagtggaaag
acctccggaggaggagacgattcctacaacaccttcttcagtgagactggagccggaaaa
cacgtccccagagcagtttttgtggatctggagcccactgtcatcggtgagatgcgcagt
gggacttaccgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaattacgcccgtggacacaacaccatcggtaaagagatcatcgaactggtgctggac
aggatccgcaaactgtcagaccagtgcaccggccttcagggcttcctggtcttccacagc
ttcggcggtggcaccggctctggtttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccacccttgaacattctgactgt
gccttcatggtcgataacgaggccatctttgatatctgccgtaggaaccttgatatcgag
cgtccctcttacaccaacctgaacaggttgatcagtcagattgtgtcctccatcactgct
tcccttcgtttcgatggcgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgcccccgtcatctcagctgagaaa
gcttatcatgagcagttaacggtgtcagaaatcaccaactcctgctttgaaccagacaat
caatttgtaaaatgtgaccctcgccacggtaaatacatggcctgctgccttttgtatcgt
ggtgacgtggtgcccaaagatgtaaatgctgccattgccaccatcaaaaccaagcgctcc
atccagttcgtggactggtgccccactggtttcaaggttggcatcaactaccagccgccc
actgtagtccctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcgacttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgaaggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattatgaggaggttggagctgatactcta
ggaaacgatgagggagaagagtattaa
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