Cyclopterus lumpus (lumpfish): 117733185
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Entry
117733185 CDS
T09199
Name
(RefSeq) protein SOGA1-like isoform X1
KO
K27704
microtubule cross-linking factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117733185
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117733185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Rsa3
Motif
Other DBs
NCBI-GeneID:
117733185
NCBI-ProteinID:
XP_034392502
LinkDB
All DBs
Position
7:complement(7508547..7583603)
Genome browser
AA seq
1677 aa
AA seq
DB search
MTKTKEVDVHNSPAHLVFASPKERRLHLRQKMESGGGTEGSDSGQTQHAELPAMVAAHPP
GEKKKKVNRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGAIHLGSRISRRSPVGGLAA
RDGKTEKSGGVKPTGKSSSSSSSSSSSSSSSASSKTAKAAKSTGGRRKVSDASIGSDDAS
KDSGCATGKLSPTDSSSELSDCASEENKLSADAASSDAESRSSRGGGPDGDKPLRDRAGH
QAAAAAAARTTCSSAERDCKDRLSLAVGTGEGSISPGEERSVTSFDSRVPASTSLAFSDL
TEEFMDGMHEEFVREIEELRSENDYLKDEMEELRSEMLEMRDMYIEDDVYQLQDLRQQLE
QANKTCRILQYRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHSQLDSVEK
KRSRLEQENEELRVRLQDLEVAKQVLQQEIDKNSQRKRGARPNNKPDKKLCPQEDSSDLK
CQLHFAKEESALMCKKLTKLVKDCEAMKEELAKFRSLYGDVNASLTVEEVADSPHTREAE
IRVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKGPHDGPQELSGVGGSLGLGLGGG
ASSENVMELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRYKSDLPPPPSALSSNSL
ASLTDGLLNASPVHSIQEGAVLISTDAPAHEEELRLARLQIGELGGKVKKLQYENRVLLS
NLQRCDLASYHSPSSSSSSSSLRLALDTDAEAGDSAECLPSPPHRKEPVGGETDALEIRE
RKKKIEDNADATTSLLGYLGQKDHDALLAMRDQARLVSTAIQLLTSPESNCLSSSPSIYH
KVCSNEAAEPCDLEKPQPHSQISELSDLADRPLVGALTSRLQALHTQLQAFVEQVDSLGK
PPAGGRDPQVEGASPLASPCASLLCSGDGQDGLNTAAEQQQPGYRDQSEPEVKGQIEENS
QSDGDGTEKQDDRRLEKREKETDDALPAHGDELRARLSDAEESALGTQGEHERHAQRETS
LQLTLLQEEHQKALLRRDFQLQSLGLQARLQRKLWCQERTLLVQESQHLKQALLLLSLKL
RCFLKQWRQGCRKDTEWKDILEMNSLKDLYLLLEEENLTSPAHQSEKRDEQPLSTNIKSS
AVSSTLADLKVALQDLSGELRQERQGSQELTQQFAKAKASWEVERTQLKSLVTQLETKSG
KAADALDPPDLKVALKREREEHQDLLADSYAAVMDLTKQLQIGERNWGREKLELLERFSQ
ERAQWEQRLGEATAQQGKSKSPGSESSADTSATNGTGSPRTKSTSELDGPEVNGRANQEE
RIQFAVPELGDLTRKNWTYLTNETPEVGDTCKTWDGPSGSCSSLVGSELDLETVQRSYTA
PDRTGIRIYYSPPAVRRMEQQKRSQEAKEPQQAQNGSSSLGVSEPDVGVAAVGALEVQPQ
QPSCFSSSYEQWLSSLSMQHRELLESRSGCIGGSIPSVVVGSDDGMAPSPAFHGLEIGEI
SANLSDDMKEMTNCVRQAIRSSSLERKSSKEPGSQVAGMSTRSTQTAAQSVSIGASNRQP
SRQQRVGVLLQSLVSSPLANNHVLASVRSNPADIHVPGQGSQPRRQAMLFTQVWITETAT
QSVLLAPPPDWRAVPLPGTGACGAFSKDPSVQEEEEEQEEEEARPGLAPPPQGTAPS
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccataactctccggctcacctcgtcttcgcctcg
cccaaggaacggagactccatctccggcagaagatggaaagcggaggcgggacggagggc
tcggacagcgggcagacgcagcacgcggagctccccgcgatggtggccgctcatcctccg
ggcgagaagaagaagaaggtgaaccgggctccgtccccggcccggccgaaggatgtaccc
ggttggtcgctcaccaagatccgcggagggattgggaccccgaccctgagcgtcaaaccg
ggagccatccacctgggtagccgcatttccaggcgcagccccgtgggaggtctggctgca
agggacggcaagacggagaagagcggtggtgtgaaaccgacgggcaaatcctcctcttct
tcttcctcctcctcttcctcctcctcctcctccgcgtcgtccaaaacggccaaggcggcc
aagagcaccggcgggcggcggaaggtgtcggacgccagcatcggatccgacgatgcatca
aaggactccggctgcgccaccgggaagctgtcccccaccgacagtagctccgagctgtcg
gactgcgcctctgaggaaaacaagctctccgcggacgctgcgagcagcgacgccgaatca
aggagcagccggggcggcgggccggacggcgacaagccgctcagggacagagccggccac
caagccgccgcggccgccgccgccaggaccacatgctcctccgcggagagggactgcaag
gaccggctctccctggccgtgggcaccggggaagggagcatatcccctggcgaggagcgc
tcggtcacctcgtttgacagcagggtccctgccagcacatccctggctttctcagacctc
acggaggagtttatggacggcatgcacgaggagtttgtccgggaaatagaggagctgagg
tccgagaatgattacctcaaagacgagatggaggagctgaggtccgagatgctggagatg
cgggacatgtacatagaagacgacgtctaccagctgcaggacctacggcaacagctggaa
caggcaaacaagacctgccgcatcctgcagtaccggctgaggaaggcagagcggcgctct
ctccgcgtggcccaaacggggcaggtggacggagaactgatacgcacgctggagcaggac
gtcaaagtggcgaaggacgtgtccatccgtctccacagccagctggacagcgttgaaaag
aagaggagtcgtctggagcaggagaacgaggagctgagggtccggctgcaggacctggag
gtcgccaaacaggtcctgcagcaggagattgacaagaactcccagaggaaaagaggagca
cgacccaacaacaaacctgacaagaagctctgtccacaggaggacagctcggacctgaaa
tgccagctccactttgccaaagaggagtcagccctgatgtgcaaaaagctgaccaaactg
gtgaaggactgcgaggccatgaaggaggagctggccaagttcaggtcgctgtacggggac
gtcaacgcctcgctcaccgtggaggaggtggctgactccccccacacgcgagaggcggag
atcagagtccacctgaagctggtggaggaggaggccaacctgctgagtcggcgcatcgtt
gagctggaggtggagaacaggggtctccgagctgagatggacgacatgaaggggccacac
gatggtccacaggagctttctggtgttggtggcagtctgggcctgggactcgggggaggg
gcttcatccgaaaacgtcatggagctccagagacacctccagtttgtggaggaggaggcg
gagctactccggaggtctctcatcgagatggaggaacagaacaaactcctgatgaacgag
ataaaccgctataaatctgatctcccgccgccgccgtccgcactgtcgtccaattcattg
gcgtcgctgacggacgggctgctcaacgccagcccggtgcactccatccaggaaggggcg
gtgcttatcagcaccgacgccccggcccacgaggaggagctcaggctggcgaggcttcag
attggagaactgggcgggaaggtgaaaaagctgcagtacgaaaaccgagtgcttctgtcc
aacctgcagcgctgtgatctggcctcctaccattctccttcctcctcctcctcttcctcc
tcacttcggctggctctggacactgacgcagaggccggagactcagctgagtgcctccca
agcccgccgcaccgcaaagagccagtcgggggtgagactgacgcccttgagatcagggag
cggaaaaagaagatcgaggacaacgctgacgcaacaacctccctcctcgggtacctgggg
cagaaggaccatgatgccttgctggccatgagagaccaggctcgcttggtttccacggcg
atccagctcctgacttccccagagtcgaactgcttgtcctcctccccgtccatctatcac
aaggtgtgcagcaacgaggcagcagagccgtgtgacctggagaaacctcagcctcacagc
cagatttcagagctgtcggacctggccgaccggcccctggtcggtgctctgaccagcagg
ctgcaggccctgcacacccagctgcaggccttcgtggagcaggtggacagcctgggtaaa
cccccggcaggtgggagggaccctcaggttgaaggagcgtctcctctggcctcaccctgc
gcctctctcctctgctctggggacgggcaggatggactgaacactgccgccgagcagcag
cagcctggttatagggaccaatcagagccggaggtcaaaggtcaaattgaggagaacagc
caatcagacggcgatgggactgaaaagcaggacgaccgccggctggagaagagagaaaag
gagacggacgatgctctgcccgcccatggcgatgaacttcgggctcggctgtccgacgcg
gaggagtcggctctcggaactcagggggagcatgagaggcacgctcagagagaaacctct
ctccaactcacactgctccaggaggagcaccagaaggctctgctccgccgggacttccag
ctgcagagtttgggcctccaggctcggcttcagaggaagttgtggtgccaggagaggact
ctgctggtccaggagtcccagcacctcaaacaggccctgttactgctcagcctcaaactg
cgctgcttcctcaaacagtggaggcagggctgcaggaaggacaccgagtggaaagacatc
ttggagatgaacagcctgaaggacttgtacctgctgttggaggaggagaacctgacgagc
cccgcccaccagtctgagaagagggacgaacaaccactcagcacaaatatcaagtcgagc
gccgtgagcagcaccttggcggacctgaaggtggcgctgcaagatttgagtggagagttg
cgacaggagagacaaggctcccaagagctcacacagcagttcgccaaggccaaggcatca
tgggaggtggagaggacgcaactgaagagcctcgttacgcagctcgagaccaaatcagga
aaagcagctgatgcactggatcctccggacctgaaggtggcgctgaagagggagcgcgaa
gagcaccaggacctcctggccgattcctacgcagccgtgatggacctaactaaacagctc
cagatcggggagaggaactggggccgagagaagctggagctgctggagaggttcagccag
gaaagagctcagtgggagcagagactgggagaggccactgcgcaacaggggaagtcaaag
tcaccaggcagcgagtcctctgcagacacatccgccacgaacggaacaggatcaccacga
accaaatccacgtcggagctggacggcccagaagtcaacgggagagccaatcaggaggag
agaattcagtttgctgtcccagagctgggtgacctcaccaggaagaactggacctaccta
accaacgagaccccagaggttggagacacctgtaaaacctgggacggtcccagcggctct
tgcagcagcttagtgggatcagagctggatctggagaccgtccagaggagctacactgct
ccagaccgcaccggcatccggatctactacagcccgcctgcggtaaggcgcatggagcaa
caaaagaggagccaggaggccaaagagccacagcaggcccagaacgggagctcctccctg
ggagtgagtgagccagatgtaggcgtagctgctgtgggagcccttgaggttcagccgcag
cagccgtcctgcttttcatcctcgtacgagcagtggctgagctcgctgtccatgcagcac
agggagctgctggagagcagaagtggttgcattggcggttcgatcccaagcgtcgtcgtc
ggctcggatgatgggatggcgccctcgccagctttccacggcctggagatcggggagatt
tccgccaacttgagtgatgacatgaaggagatgaccaactgtgttcgccaggccatacgc
tcttcctctctggagaggaaatcctcaaaggaacctgggagtcaggtagcgggcatgtcc
accaggtccacgcagactgctgcccaatctgtcagtatcggggcttcaaaccgacaacct
tcccggcagcagagggtcggggttctactccaaagcctggtctcctcgcccctcgccaac
aaccacgtcctcgctagtgtccgctcgaacccggcagatatccacgtccctggacaaggt
tcacagccgcgtcgacaggccatgctgttcacccaagtatggatcaccgaaactgcaacg
cagagtgtccttctggctccacctccagactggagggcagttcctcttccagggaccgga
gcctgtggagccttcagcaaagatccatcagtgcaggaggaggaggaggagcaggaggag
gaggaggctcggcctgggctcgctccaccaccacaagggacagccccgtcctga
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integrated database retrieval system