Cyclopterus lumpus (lumpfish): 117733198
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Entry
117733198 CDS
T09199
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117733198 (apex2)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117733198 (apex2)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117733198 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
117733198
NCBI-ProteinID:
XP_034392540
Ensembl:
ENSCLMG00005012566
LinkDB
All DBs
Position
7:complement(19161765..19165176)
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AA seq
588 aa
AA seq
DB search
MKIVTWNINGIRTFGGGIKKALDSLGADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPAAAEEGLTGLLTNHEGAVGCYGDQTEFCSEELRLLDNEGRAV
ITQHRIMCSENEQTITVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVL
GDVNTSHRQIDHCDPSDNDEFGEDPGRKWLNAFLHSGAEEGEMKEQEPDEESAVTSSETI
RTGKFVDTFRFFHPTRTGAFTCWSTLTGARQTNYGTRIDYVFADCLLAKEQFVAADIMPE
VEGSDHCPVWGHLSCSLLPSSKPPPLCTRFLPEFAGRQQKLSRFLVKVDQKSTLSEQRDA
LPGSQEEGEKRENLNPSGAGNVSGKKRSLTSDSVVPKGKKTKTVKNSLTPKGSLLSFFKP
KLTNAVPSTEAPVKHCEKTLRMDEVTSSQNSQKAFCHKQRNQYYQSQPVTNSVPEDTELV
SDGSPQLCTSNTTEESHKQVATKPSTPHPTAGHPEAKKGASLVFWKSVFHGPPPPPSCKV
HGEPCVLRTVKKEGPNVGKQFFVCARPQGHASNPEARCNFFAWVEKGK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcacctggaacataaatggcatcaggactttcggaggcggcattaaaaag
gctcttgattcactgggcgcggacattatttgcgtccaagaaacaaaggtgacaagagac
ttacttgatgaaagaacggccatcgttgacggctacaactcctatttcagcttcagccga
gggcgcagcggctattcaggggttgccacttactgtaaagacagtgccactccagctgct
gcggaggagggtcttacgggtctgttgaccaaccacgaaggggctgtcggatgctatggt
gaccagacggagttctgtagcgaggagctgcggcttttagacaatgaaggacgagccgtt
atcacacagcacagaatcatgtgctcggagaatgagcaaactattactgtcatcaatgta
tactgtcctcgggctgacccagaaaagccggagcgaaagcagttcaaactgcagttctac
aagttgcttcagagtcgggctgaagctatactgaaagatggaagccacgtgattgtttta
ggggatgtaaatacatctcaccggcaaatagaccactgtgaccccagtgataatgatgaa
tttggggaagaccctgggaggaaatggctcaatgcctttttgcacagtggcgcagaagaa
ggggaaatgaaagagcaggaacccgatgaagaatcagcggtaacttcatcagagaccatc
cgtaccggaaaatttgtggatacgtttcgctttttccacccaacccgaaccggcgccttc
acatgctggagcactctcaccggagcacggcagaccaactacggcacgcgcatcgactac
gtattcgctgactgcctcctagccaaggagcagtttgtggcagcagacatcatgccagag
gtggaggggtcggaccactgccctgtgtgggggcacctgagctgctccctcctgcccagc
tcaaagccccctcccctctgtacgcgcttcctgccagagtttgctggcaggcagcagaaa
ctctcccgcttccttgttaaagtggaccaaaaatcaactctgtctgagcagagggacgca
ttacccggatctcaagaagagggcgaaaagagggagaatttaaacccctccggagctgga
aacgtctctggtaaaaaacggtcattaacatcagactctgttgtcccgaaggggaaaaag
actaagactgtgaaaaactctttaaccccaaaggggagccttctctcctttttcaaaccc
aaactcacaaatgctgtcccctcaactgaagcccctgtaaagcactgtgaaaaaacactc
cgcatggacgaagtaacttcctcacaaaactcccaaaaagctttttgtcacaagcagcgt
aaccagtactaccagtcacaaccagtaacaaacagcgtacctgaagatactgagcttgtc
tccgatgggtcaccacagctgtgcaccagcaacaccacagaggaaagtcataaacaggtg
gcgactaagccttcaaccccacaccccactgcgggacacccagaagccaagaaaggggca
tccttagtgttttggaagtctgtttttcatggaccgcccccaccgccctcctgtaaggtc
cacggggaaccctgtgtgcttcgtactgtgaaaaaggaggggccaaacgtgggcaaacag
ttctttgtgtgtgcccgccctcagggacatgcctccaatcccgaggctcggtgtaatttc
tttgcatgggttgaaaaggggaagtga
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