KEGG   Cyclopterus lumpus (lumpfish): 117733213
Entry
117733213         CDS       T09199                                 
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1
  KO
K09276  Y-box-binding protein 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clum03000]
    117733213 (ybx1)
   03019 Messenger RNA biogenesis [BR:clum03019]
    117733213 (ybx1)
   03041 Spliceosome [BR:clum03041]
    117733213 (ybx1)
Transcription factors [BR:clum03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, YB-1/DbpB-like
    117733213 (ybx1)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     117733213 (ybx1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117733213 (ybx1)
Spliceosome [BR:clum03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    117733213 (ybx1)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2 DUF6426
Other DBs
NCBI-GeneID: 117733213
NCBI-ProteinID: XP_034392558
Ensembl: ENSCLMG00005003234
UniProt: A0A8C2WKZ6
LinkDB
Position
7:9309792..9315024
AA seq 318 aa
MSSEAETQQPPDAPADEESPSSPAAEASAADKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGIAVQGSKYAA
DRNRYRRYPRRRGPPRNGEYPDNYQSDGEGEPGSSGGGGGREGREGREGREGARDKSSRD
GGESAPEGDVQQQQQRRPAYPGRRRYPPYFGGEGDETQGGPDQGNKPARQSYYRGFRPRG
PPRPRPVQDGEEDKENQGGEDGQNQQPRQRRYRRNFNYRRRRPQTGGKPGQETKEAKTGG
DPSAEKTSAPEAQQGGAE
NT seq 957 nt   +upstreamnt  +downstreamnt
atgagcagcgaggccgagacgcaacagccacccgatgcccctgccgatgaggagagccca
tccagcccggcagccgaagcttccgcggcggataagaaggtcatcgcaacaaaagtcttg
ggtacagtcaagtggttcaacgtcaggaatggatatggttttatcaatcggaatgataca
aaggaggacgtttttgtacaccagacggccatcaaaaagaacaacccaaggaaatacctt
cgcagtgttggagatggagaaactgtggagtttgacgtagttgagggagagaagggagcg
gaggcggcaaatgtcactggcccaggaggcattgcagtccagggaagtaagtatgctgct
gacaggaaccgctataggcgctatcccagaagaaggggccctcctcgcaatggagaatat
ccagacaactaccagagtgacggagagggcgagccaggcagcagtggcggcggaggagga
cgcgaaggacgcgaagggcgcgaaggacgtgaaggagctcgagacaaaagcagccgagat
ggcggagagagtgcacctgaaggagatgtgcagcaacagcagcagcgcagacccgcttat
cctggcagacggcgctacccaccatactttggaggcgagggtgacgagacccagggaggt
cctgaccagggcaacaaaccagcgaggcagagctactacagaggcttccgaccaaggggt
ccaccccgtcccagaccagtgcaggatggtgaggaggacaaggagaatcagggtggtgaa
gatggtcagaaccaacagccccgccaacggcgctaccgccgcaacttcaactaccggcgc
agacgtccacagactggtggcaaacccggccaggaaactaaggaggccaagacaggaggt
gacccatctgcagagaaaacgtccgctcccgaggcccagcagggtggggctgagtag

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