Cyclopterus lumpus (lumpfish): 117733213
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Entry
117733213 CDS
T09199
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733213 (ybx1)
03019 Messenger RNA biogenesis [BR:
clum03019
]
117733213 (ybx1)
03041 Spliceosome [BR:
clum03041
]
117733213 (ybx1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
117733213 (ybx1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117733213 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
117733213 (ybx1)
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
General mRNP proteins
117733213 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
DUF6426
Motif
Other DBs
NCBI-GeneID:
117733213
NCBI-ProteinID:
XP_034392558
Ensembl:
ENSCLMG00005003234
UniProt:
A0A8C2WKZ6
LinkDB
All DBs
Position
7:9309792..9315024
Genome browser
AA seq
318 aa
AA seq
DB search
MSSEAETQQPPDAPADEESPSSPAAEASAADKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGIAVQGSKYAA
DRNRYRRYPRRRGPPRNGEYPDNYQSDGEGEPGSSGGGGGREGREGREGREGARDKSSRD
GGESAPEGDVQQQQQRRPAYPGRRRYPPYFGGEGDETQGGPDQGNKPARQSYYRGFRPRG
PPRPRPVQDGEEDKENQGGEDGQNQQPRQRRYRRNFNYRRRRPQTGGKPGQETKEAKTGG
DPSAEKTSAPEAQQGGAE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacgcaacagccacccgatgcccctgccgatgaggagagccca
tccagcccggcagccgaagcttccgcggcggataagaaggtcatcgcaacaaaagtcttg
ggtacagtcaagtggttcaacgtcaggaatggatatggttttatcaatcggaatgataca
aaggaggacgtttttgtacaccagacggccatcaaaaagaacaacccaaggaaatacctt
cgcagtgttggagatggagaaactgtggagtttgacgtagttgagggagagaagggagcg
gaggcggcaaatgtcactggcccaggaggcattgcagtccagggaagtaagtatgctgct
gacaggaaccgctataggcgctatcccagaagaaggggccctcctcgcaatggagaatat
ccagacaactaccagagtgacggagagggcgagccaggcagcagtggcggcggaggagga
cgcgaaggacgcgaagggcgcgaaggacgtgaaggagctcgagacaaaagcagccgagat
ggcggagagagtgcacctgaaggagatgtgcagcaacagcagcagcgcagacccgcttat
cctggcagacggcgctacccaccatactttggaggcgagggtgacgagacccagggaggt
cctgaccagggcaacaaaccagcgaggcagagctactacagaggcttccgaccaaggggt
ccaccccgtcccagaccagtgcaggatggtgaggaggacaaggagaatcagggtggtgaa
gatggtcagaaccaacagccccgccaacggcgctaccgccgcaacttcaactaccggcgc
agacgtccacagactggtggcaaacccggccaggaaactaaggaggccaagacaggaggt
gacccatctgcagagaaaacgtccgctcccgaggcccagcagggtggggctgagtag
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integrated database retrieval system