Cyclopterus lumpus (lumpfish): 117733217
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Entry
117733217 CDS
T09199
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04218
Cellular senescence
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
clum04270
Vascular smooth muscle contraction
clum04530
Tight junction
clum04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117733217 (cacna1db)
04020 Calcium signaling pathway
117733217 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117733217 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
117733217 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117733217 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
117733217 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
117733217 (cacna1db)
04270 Vascular smooth muscle contraction
117733217 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117733217 (cacna1db)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117733217 (cacna1db)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117733217
NCBI-ProteinID:
XP_034392562
Ensembl:
ENSCLMG00005000103
LinkDB
All DBs
Position
7:complement(8796990..8860757)
Genome browser
AA seq
2192 aa
AA seq
DB search
MQEADEQSEGAQYASNKRTTPPGDASALWSESQTRLHQLHPPEPLHAPHSTGKPVGSSCG
LFGANSGVQDSGGTGSGVSPVLAWHAAISAARQVQGDVAKPDMSTQPTVCTTGQPPVGSL
AQRKRQQYAKSKKQGGSTNSRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFANC
VALAIYIPFPGDDSNSTNQELETVEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWNML
DFVIVIVGLFSVVLEMITKDADSGGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVV
LNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYVIQTGALAEEEATPCAVS
GHGRHCLLNGTSCKEGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMGFE
LPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLD
WITQAEDIDPENEEEGDEEGKRNPSMPSETESANTENHNGEENKSPCCGPLCRQWRRWNR
FCRRKCRAAVKSVSFYWLVIILVFLNTLTIASEHYNQPDWLTKVQDVANKVLLAMFTMEM
LVKMYSLGLQAYFVSLFNRFDCFVVCGGIVETILVELAFMCPLGISVFRCVRLLRIFKVT
RHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDN
FPQALLTVFQILTGEDWNTVMYDGIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAI
AVDNLADAESLNTAQKEEEEAKKRKNSAKDISTEKKKVEITDVKDGETKVPAEVLLEEDK
ESYPAIDSLACDDDDNNAVLPEVPSGPRPQRLSELSIKEKTPPIPVGSAFFIFSSTNPFR
VFCHKLINHQIFTNLILVFIMLSSISLAAEDPIRNFSARNIVLGYFDYAFTAIFTVEILL
KMTAFGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAIN
RAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPDDCK
GTYILYNNGDTAMPMVKERIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRE
NMGPIYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCV
EYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYA
MDILNMVFTGVFTVEMILKLIAFKPRGYVGDAWNVFDALVVIGSVVDIILSQNTEDSARI
SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFG
KIAMVDGTQINRNNNFQTFPQAVLMLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEER
TCGSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYD
PEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFAL
VRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQ
DYFRKFKRRKEQGLVGRRSWERLNTTMALQAGLRTLHDIGPEIRRAISCDLQEAGLVDAI
GEEEEDIYRRNGGLFGNHVSADQQGCFHPTTVTQRPLQVLPFSCSASTEPTESGRRTSDA
ERGEEVEMNSSPIQYNHHCHNPHSYHYPHCVSTCHQSPIPSNANLNNANVPSLPPMTNGR
QQKCLLRGERPSSTKKGPSASTYSKGVHDKLWKSHSLRTRYYEADIRSESGGGLYSTIRR
EEPGGGDSDDERGSGEYFSGEEFHEDDIMLTKDRLSNKDHHDEEGDCDLGVSRGDHHSDG
CYDDDQQPICQVGRRSPRRWLLPSPQGSNRPTFSFECLRRRSSQDDTPPSPSCTALPLHL
VQQQVMAVAGFDASRIHRLSPTGSLRSWVTPPASPISRGCSPCYTPLIQVDWRSPGSVSS
LPGAVKRSSWYTDGQDGPPSLSRSPSHLQLPAECCSHIMQKRGSANSVVEAVLISEGLGK
YARDPKFVTATKHEIADACEMTIDEMESAASNLLNGSLDNGNTGGAGSVSSDPLATTNVR
DCSIRDYSDEEPYVALKCEEDLTDEMICITSL
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagcagatgaacagtctgaaggggcacagtatgccagcaacaaaaggaccact
ccccccggtgacgcctcagctctctggtcagaaagccaaacccgtctgcaccagctccat
ccccctgagcccctgcatgccccgcatagcaccggcaagcccgtgggctcctcttgtggt
ctctttggggccaacagtggcgttcaggactccggtggcactggttccggtgtcagcccg
gtcctcgcttggcatgccgccattagcgctgctcgccaagtgcagggcgatgtcgccaag
cctgacatgagtacgcagcccacagtttgcaccacgggacaacctcctgtgggctcactg
gcacagaggaagaggcagcagtacgccaaaagcaaaaagcagggaggatctaccaacagc
aggccacccagagctctgttctgcctcaccctcaacaacccgatccgcagggcctgcatc
agcctggtggagtggaaaccgtttgatatctttatactgctgtctatttttgccaactgt
gtggccttagccatctacatccccttccccggagacgactccaactctaccaaccaagaa
ctggaaacagtagaatacgccttcctgatcattttcacgatagagacatttctgaagatt
attgcttacggtctggtcatgcaccaaaactcctacgtcagaaatggctggaacatgctg
gactttgtcatcgtcatagtggggttgttcagtgtggttctggagatgataaccaaagac
gctgattctggcggccagtctggaggcaaacctggggggtttgatgtcaaggccctccga
gctttccgcgtgctacgaccacttcgccttgtctctggagtccctagtttacaggtggtt
ttaaactccattattaaagccatggttcccctgcttcacatcgctctgctggtcctcttt
gtcattatcatctacgccatcattgggctggagctcttcattggcaaaatgcatgcaaca
tgctacgtgatacaaacaggtgccctcgcggaagaagaggccacgccatgtgcggtttca
gggcacggccgccattgcctgctcaatggtacgtcttgcaaagagggctggcaaggcccc
aacaacggcatcaccaacttcgacaactttttgtttgccatgctcactgtgttccagtgc
atcaccatggagggctggaccgacgttctctactggatgaacgatgcaatgggctttgag
ctgccctgggtctactttgtcagtctggtcatctttgggtccttctttgttctcaacttg
gttttgggtgtgttgagcggagagttttccaaagagcgagagaaggccaaggctcgggga
gatttccagaagctacgtgagaagcagcagttagaggaagacctgaagggctacctggac
tggataacccaggcggaggacattgaccctgagaacgaggaggagggcgacgaggagggc
aagcgtaacccgagcatgcccagtgagacagagtcggcaaacacagaaaatcacaacgga
gaggaaaacaaatccccctgctgtggtccgctatgtcgtcagtggcgacggtggaaccgt
ttctgccgcaggaagtgtcgagcagccgtgaagtctgtgtcgttttattggctggtcatc
atcttggtgttcctcaacaccctcaccattgcctctgagcactacaaccagccggactgg
ctgaccaaagtccaggacgtagccaacaaagttctcctggcaatgttcaccatggagatg
ctcgtgaagatgtacagtctggggctgcaggcgtacttcgtgtccctgtttaaccgcttt
gactgtttcgtggtgtgcggaggcatcgtagagaccatcctggtggagctggccttcatg
tgtccgctgggcatctccgtcttccgttgcgtacgactccttcgcatcttcaaggttacg
cgtcattgggcatctctcagtaacctggtggcctctctgctcaactccatgaagtccatc
gcttccctgttgctgctgctcttcctcttcatcattattttctccctgcttggcatgcag
ctctttgggggcaagttcaactttgatgagactgtgaccaaaaggagcacgtttgataac
ttcccccaggccctgctcaccgtgttccagatcttgacaggagaagactggaacacggtg
atgtatgacggtatcatggcgtacggcggtccggcctcctctggaatggtggtctgcatt
tacttcatcatcctctttatctgtggaaactacatcctgctaaacgtcttcttggccatc
gccgttgacaacctggcagacgcggagagcctcaacacagcacagaaggaggaagaggag
gccaagaagaggaagaatagtgccaaggatattagcactgagaagaagaaggttgaaatc
acagatgtcaaggatggagagaccaaggtgccagcagaagtgttgttggaggaagacaag
gagtcatatcctgccatcgactctctggcttgcgatgatgacgacaataatgccgttctc
ccagaagtcccgtcagggccccgccctcagaggctgtcggagctcagcatcaaagagaag
accccgcccatcccggtgggcagcgccttcttcatcttcagcagcactaacccgtttcgt
gtgttctgccataagctgatcaaccatcagatcttcaccaacctaatcctggtcttcatc
atgctcagctccatctctctggctgctgaggacccaatacgcaacttctctgctcgcaat
atcgtacttggttattttgactatgctttcaccgcaatctttactgttgagatcctgttg
aagatgacagcgtttggagcgtttcttcataaaggggcgttttgtagaaactacttcaac
ctcttagacctgctggtcgttggtgtgtctctggtctcctttggcatccagtcctctgct
atctcagtggtgaagattctccgtgttctgagagtcctccgtccgctcagggccatcaac
agagccaagggactgaagcatgtggtccagtgtgtgttcgtggccatcaggaccatcggc
aacatcatgatcgtcaccacgctgctgcagttcatgttcgcttgtatcggagtgcagctc
ttcaagggtaaattttatcgctgcaccgatgacgccaagtccagcccagacgactgcaaa
ggtacctacattctctacaacaacggggacacggcgatgcccatggtgaaggagaggatc
tggtacaacagcgacttcaactttgacaacgtcctcatggccatgatggctctttttact
gtctccacattcgaagggtggcccactctgctctacaaggccatcgactcgaacagagag
aacatgggtcccatctacaactaccgcatcgagatctccatcttcttcatcatctacatc
atcatcatcgccttcttcatgatgaacatctttgtcggtttcgttatcgtcacctttcag
gagcagggggagaaggagtacaagaactgcgagctggacaagaaccagcgtcagtgtgtg
gaatatgctctcaaagctcgtcctctgcggcgctacatccccaaaaacccttaccagtac
aagttctggtatgtggtcaactctacaggctttgagtacgtcatgtttgtcctgatcatc
ctcaacaccttgtgtctggccattcagcaccatggtcagtctcatctgtttaattatgcc
atggacatcctcaacatggtcttcaccggggtattcactgtggagatgatcctcaagctc
atcgccttcaaacccagaggctatgtcggggacgcctggaacgtcttcgatgccctggtc
gtgattggcagtgtagtcgacatcatactcagccagaacacggaggacagcgctcgcatc
tccatcaccttcttccgcctgttcagagtgatgcgattggtcaaacttctgagtaggggg
gagggcatcaggactctgctttggaccttcatcaagtctttccaggctcttccctacgtt
gcactcctgatagccatgctgttcttcatctatgctgtaatcgggatgcaggtgtttgga
aaaatagccatggtggatggaactcaaatcaaccgcaacaacaactttcaaacctttcct
caagctgtgctgatgctcttcaggtgtgccacaggtgaggcctggcaggagatcatgctg
gcctgtctgccggggaagctgtgtgatccggagtcggactacaaccccggagaggagaga
acttgcggcagcggcttcgccattatctacttcatcaccttctacatgctctgtgctttc
ctgatcatcaacctgtttgttgcggtcatcatggataactttgactatctgacccgtgat
tggtccattcttgggccgcatcacctggatgagtttaaaaggatctggtctgaatacgac
cctgaagccaagggcaggataaagcacctcgacgtggtgactctgctgaggaggatccag
cccccgctgggctttggcaagctctgccctcacagagtggcctgtaagcgtctggtggcc
atgaacatgcccctcaacagtgacgggaccgtcatgtttaatgccaccttgtttgctctg
gtccgcactgctctcaagattaagacagagggtaatctggagcaagccaatgaggagctt
agagctgtgattaagaagatttggaaaaggacaagcatgaagctgctggaccaagtggtg
ccccctgcaggcgatgacgaggtaacagtggggaagttctatgccaccttcctgatacag
gactacttcaggaagttcaagaggcgcaaagagcaaggtcttgtaggaaggcgctcgtgg
gagaggctgaacacaaccatggctctgcaggccggcctgcgcacgctgcatgacattgga
ccagagatccgtcgagccatatcatgtgacctgcaagaggcggggctagtagatgctatt
ggagaggaagaagaggacatctacaggcgtaacggcggcctttttgggaaccacgtcagt
gctgatcagcaaggctgctttcacccgaccacggtcacccagcggccgctacaggtcctg
cccttctcctgcagtgcctcaactgaacccaccgaatcaggcaggagaaccagcgacgcc
gagagaggagaggaagtagagatgaactcctcacccatccagtacaaccatcattgtcac
aacccgcattcgtatcattatcctcactgcgtttccacttgccatcaatcgccaatcccc
tccaatgccaacctcaacaatgccaacgtgccctcacttccccccatgaccaacgggagg
cagcagaagtgcttgctaaggggagagcgtccatcctccaccaaaaagggaccatcagcg
tccacttacagcaaaggagtgcacgacaagctttggaagtcacactccctgaggacacgc
tactatgaggctgacattaggtcagaaagcggcggtgggctttactccactattcgccga
gaggagccggggggtggagacagcgatgacgagcgagggtcgggagagtacttcagcggg
gaggagtttcacgaagacgacatcatgctcactaaggacaggttgtcaaacaaggaccac
catgatgaagagggtgactgtgaccttggggtttccaggggtgaccaccattctgatggt
tgttatgacgatgaccaacagccgatctgccaagttggcaggcggtcgcccaggaggtgg
cttctaccctcacctcaaggttccaaccgaccgacgttcagctttgagtgtcttcgcaga
agaagtagtcaggatgacacccctccctctccatcctgcacagctcttccactacacctg
gtgcagcaacaggtcatggcggtggccggtttcgacgccagcagaattcaccgtctgtct
ccgacggggtcgcttcgctcctgggtcacgcctccggcctcacccatcagccgcggctgc
tcgccctgctacacaccgctcatacaggtggactggcgcagccccggcagcgtcagcagc
ctccccggagcagtgaagaggagttcttggtacaccgacggccaggacggtcctcccagc
ctcagccgctctccgtcacatctacagcttcctgcagaatgctgctcacacattatgcag
aagagaggcagtgccaacagcgtggtggaggctgtgttgatctcggagggtctgggaaaa
tacgccagggaccccaagtttgtgacagcaaccaaacacgaaatcgcagacgcctgcgag
atgaccattgatgagatggagagtgccgccagcaacctgctgaacgggagtctggataat
ggcaacacggggggagcgggtagcgtcagctcggacccgctggccaccacgaatgttaga
gactgcagtatccgggactacagcgacgaagagccgtacgtggctctgaaatgcgaggag
gacctgacagatgagatgatatgcatcacgtcgctatag
DBGET
integrated database retrieval system
