Cyclopterus lumpus (lumpfish): 117733224
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Entry
117733224 CDS
T09199
Symbol
rerea
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733224 (rerea)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117733224 (rerea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
DUF7952
Myb_DNA-binding
CCDC47
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
117733224
NCBI-ProteinID:
XP_034392577
Ensembl:
ENSCLMG00005008415
LinkDB
All DBs
Position
7:complement(11419067..11536110)
Genome browser
AA seq
1559 aa
AA seq
DB search
MTADKEKEREKERDRDRDRDRDKRESGKSRRQDGDRGDRESESSRPRRSCTLEGGAKNYA
ESDHSEDEDNENGSTGGGLGTAEEAGKKGKKKTPKKKSRYERTENGEITSFITEDDVVYR
PGDCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRNNE
NDSGRELVITDPVVRSRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARIDSFFY
ILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGQAVTENEELVWMPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKKPV
PKLIEKCWSEDEVKRFIKGLRQFGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASCR
AHRRHRRQPVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACR
HCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEEDGLSG
KHSMRTRRNRGSMSTLRSGRKKQTGSPDGRTSPTNEDLRSSGRTSPSAASTDSTDSKTDS
MKKPSKKIKEEAPSPMKSAKRQREKGASDTEEPERASAKKSKTQELSRPDSPSECEGEGE
GEGEGEGESSDGRSINEELSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQQLLQSQ
HPQVIQCQPGTSSASSAPPPPTISVPSLPPQVSPTAASTSLPPQPLPLASPLSLIQSGAS
LHPQRLPSPHSPLTQAPPPAPTVPPQSLPSSHHGPMPPLAHPLQPGLSHMPHPLSMPPQG
FPMGQSQVPPLPMCGQSQRPHSPPSQSQSSAQPGQPPREQPLPPAPMSMPHIKPPPTTPI
PQIPNPQSHKHQPHVSAPPFPQMPSNLPPPPALKPLSSLSTHHPPLAHPPPLQLMPQGQQ
LQPPPAQPPVLTQSQSLPPSASHQPPPAPPLPPSAAASHSNGPPQPLFSSHPFNTVLPPT
GPPTGPPPSSANSMPGIQPPSSSAPPSSISMPLPASVTCAGPGPMLPPVQIKEEPLDETE
EPESPPPPQRSPSPEPTIVNTPSHASQSARFYKHLDRGYNSCARTDYYFTPLASSKLAKK
REEALEKAKREAEQKLREEKEREREREREKERERDRDRDREREKEAERAAKASSSSHESR
MVEAHMVGHAHMRTHYDAQPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFFV
SLNPSDPLLAYHMPGFYNADPAMRERELREREMREREIRERELRERMKPGFEVKPPEMDS
LHPSTNPMEHFARHGAMTLPPMAGPHPFASFHPGLNPLERERLALAAGPQLRPEMSYPER
LAAERLHAERMATVANDPIARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGGGECLVCP
PGSGGHPLAIEAMAAGPHLARFPYPHGAIPNALLGQHPHEHEMLRHPVFGTPYPRELQGL
PPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaagagaaggagagggagaaagagcgggacagggacagagacagggac
cgggacaagagagagtctggtaagtcccgccggcaggacggggaccggggtgaccgtgag
agtgaaagctccaggcctcggcgcagctgtacgctggagggcggggccaagaactatgca
gagagcgaccacagcgaggatgaggacaacgaaaatggcagcacaggtggaggactcggc
acggcagaagaggccggcaaaaagggcaagaagaagacgcccaagaagaagtcgcgctac
gagcgcacagagaacggagaaatcacgtccttcatcacagaagacgatgttgtttacaga
cccggagattgtgtatacattgaaagtcggcggcccaacactccctacttcatttgtagc
attcaggatttcaagctgagtaaacgggaccatctgctgatgaatgtgaaatggtactac
cgccagtcggaggtgcccgactctgtctaccagcacctggtgcaggatcgcaacaatgaa
aacgactctggccgggagctggtcatcacagacccagtggtcagaagtcgagaactcttc
atctccgactatgtggacacttatcatgctgctgctctcagggggaaatgcaacatttcc
catttctccgacatttttgctgccagggagttcaaagcccgcatcgactcctttttctat
atcctcggatataaccccgagaccaggcgactaaacagcacacaaggggaaatccgagta
ggacccagtcaccaagccaagctccctgagctgcagcctttcccttctcctggtggccaa
gccgtgaccgagaacgaggagctggtctggatgccaggggtcaatgactgtgaccttctc
atgtaccttagagccgcaaggagcatggctgcttttgcaggaatgtgcgacggaggctca
acagaagacgggtgtttagcagcctctcgagatgacactactttaaacgcacttaacact
cttcacgagagcagctatgatgcaggaaaagctctccagcgtctggtgaagaagccggtc
cccaaactgatagagaagtgctggtctgaggatgaagtgaagcgcttcattaaagggttg
agacagttcggcaaaaacttcttcaggatccgaaaagagctgctgcccaacaaagaaacg
ggagagcttattaccttctactactattggaagaagacccccgaggcagccagttgtcga
gcccaccgcagacaccgccgccagcccgttttccgtcgcatcaagacgcgaaccgcttca
actcctgtcaacactccctcacgccccccctccagcgagttcttggacctcagctcagcc
agtgaagatgactttgacagtgaagacagcgaacaggagctgaagggctacgcctgccgc
cactgtttcactaccacctccaaggactggcaccacgggggtcgggagaacatcttgctg
tgcacagactgccgcattcacttcaagaagtacggtgagctgccccccatcgagaagccc
gtggacccgccgccatttatgttcaaacctgtcaaagaggaagaggatggactcagcggg
aagcatagcatgaggacccgacggaacagaggctcgatgtcgacgctacgtagtggtcgt
aagaagcagacaggcagtcctgatggcagaacctcgcccaccaacgaggacttgcgctcc
agcggacgtacctctcccagcgcagcaagtaccgacagcacagacagcaagacagactcc
atgaagaagcctagcaagaagattaaagaggaggctccttcaccgatgaagagtgccaaa
cggcagcgagaaaagggagcctcagacacagaggagcctgagagggccagtgccaaaaag
tccaagacacaagagctgagtcggccagattcgccctcagaatgcgagggggaaggtgaa
ggtgagggtgagggtgagggtgagagctctgatggacgcagcatcaacgaggagctcagt
agcgatcctaaagacattgaccaggacaaccggagctcctccccaagcatccccagcccc
cgcgacaatgagagcgactcagactcgtctgcccagcagcagcagctcctgcagagccag
caccctcaagtcatccagtgtcagccaggcacctcatccgcctcttcggcaccacctccg
cctacaatctcagtcccctcacttcccccacaggtctccccgacagcagcctccacctct
ctccctccccagcctctgcccctggcaagccctttgtctctgatccagtcaggagcatcc
ctccaccctcaaaggctcccctccccacattcacctttgactcaggctccgcctcctgcc
cccacagtcccacctcaatcgttacccagctcgcatcatgggccgatgcctcccttggca
catccactgcagcctggcctctcacacatgcctcaccctctctccatgccccctcagggc
ttcccaatgggtcagtctcaggtcccacccctgccaatgtgtggccagtcacagagaccg
cactctcctccttcccagtcccagtcatctgctcagcctggccagcctcccagagagcag
ccccttccccctgccccaatgtccatgcctcacatcaagcccccgccaactacacccatc
cctcagatacccaacccacagtcccacaaacaccaaccccacgtgtcggcacctccattc
cctcagatgccttcaaacctgccgccacctcctgccctcaagcccctcagctctttatcc
acacaccatcctccattagcacacccacctcccctacagctcatgcctcagggtcagcag
cttcagcctccaccagcgcagcctccagttctcactcagtcccagagcctccccccatca
gccagccaccaacctcctccagctcctcctctgccaccctccgcagcagcctcacactcc
aatgggccgccgcagccgctgttctcgtctcatcctttcaatacagttctacctccaacc
ggacctccaaccggccctcccccatcctcagcaaactctatgcctggcattcagcctcca
tcttcctccgctccaccctcctccatctccatgccactacctgcctctgtcacttgtgcc
ggcccgggcccaatgctcccacctgtacaaatcaaagaggagcctctggacgagacagaa
gagccagagagcccaccaccccctcagagaagcccctccccagagcctaccattgtcaat
acgcccagccatgccagccagtcagcacggttctacaagcacctggaccggggttacaac
tcgtgtgctcggacagattactacttcactccactggcttcatctaaactggcaaagaag
cgagaagaagctctggagaaagccaagagggaagcagagcagaaactacgggaagagaag
gagagagagagggaaagggaaagggaaaaagagcgggagcgagatcgagatcgagatcga
gaacgagaaaaagaagcagaacgagctgcgaaagcctccagttcctctcatgagagcagg
atggttgaagctcatatggttggccacgcccatatgcgtacacattatgacgcccaaccc
actactatcgcagctgtgcctccgtacatcggccccgacacccccgccctgcgcaccctc
agcgagtacgcccgaccccacgtcatgtcccccaccaatcgaaaccaccctttctttgtg
tccctcaacccttcagacccgctgctggcctatcacatgcctggcttttacaatgccgac
ccagccatgcgggagcgtgagctacgagaacgggagatgcgtgagagggagattcgtgag
agggagctgagggaaaggatgaaacctggttttgaggttaagcctccagagatggactca
cttcacccttccacaaaccccatggagcactttgcccggcatggggccatgacgttaccc
cccatggccggccctcaccctttcgcctccttccatccgggcctgaacccattagagcgt
gagcggctggcccttgctgctgggccccagctgcggccagaaatgagctacccagagagg
ttggctgcagagagactccatgcggagaggatggccacagtggccaacgatcccatcgcc
cgtctacagatgttcaatgttacgccacaccaccaccagcactcgcatattcactcccat
ctccacctccaccagcaagatcctcttcaccaaggtggtggggaatgtcttgtgtgtcct
ccaggctcggggggccatcccctggcaatagaggccatggcagcaggacctcacctggct
cggtttccttacccgcacggcgccatccccaacgctctccttggccagcatccacatgaa
cacgagatgctgcgccacccagtcttcggtactccatacccacgggaactacaaggtctg
ccaccgcccatgtctgcagcccaccagcttcaggccatgcatgcccagtctgctgagctc
cagaggctggccatggagcaacagtggctccacggacaccatcacatgcacggaggacca
ctgcctggtcaggaggactactacagccggctgaagaaggagagtgacaagcagctgtaa
DBGET
integrated database retrieval system
