Cyclopterus lumpus (lumpfish): 117733230
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Entry
117733230 CDS
T09199
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117733230
03036 Chromosome and associated proteins [BR:
clum03036
]
117733230
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117733230
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117733230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
DUF7675
Motif
Other DBs
NCBI-GeneID:
117733230
NCBI-ProteinID:
XP_034392594
Ensembl:
ENSCLMG00005019699
LinkDB
All DBs
Position
7:397171..447554
Genome browser
AA seq
1335 aa
AA seq
DB search
MTSPQPLLCRSSVSLSNEASHKEEDADEEEQGEEFEFDDMDDMGPPEMSSGSLIRSDWRA
DTAVSNFYANSDPVQGTAIQDMHGTTRTGQKGHNPALYQQHCSDMEVRESPEGYSTSSDL
GVTGESESFWKANSIYEEKSSAGGQDKSGSAINGCNSQQDTAETGVPSLVSPQTEHHTAE
IGGPANQSPDSVVRDLKVIYDDVPAENLQHPVEDVDDIYEDIQRPDHRGSNGWSSSEFES
YDELSDSESVPPPRSSSKLPADVLRLKERCAVTRRELAVRLTPPHVAHIKQSCDTKVQQL
MKAARSGTRGSLEKTKLAMIRKVSFLQKKDSTGEGRDDAGYLDVSVCELKHPPPQLCPMP
EGLSSQQVVRRLILSSIVQSESSYLNSLKRILQEYQKPLLEPQNWILNPKKVRHIFYRLQ
EIHQCHSMFQIALASRVAEWDHSETIGDLFVASFSKSMVLEVYSDYINNFTNAMTLIKKA
CMSKPAFLDFLKKKQASSPDRITLYGLMVKPIQRFPQFILLLQDMLKNTPKIHNDRLPLQ
LALTELETLAEKLNEQKRLADQEAEIQQLAHSVGDRNLSKLLNSGQRQLIQCELLTEIVY
GDEGQVLKSKERKVFLLNDTLICANVNLKGPPDISSLVPVGPQYTVKWCAPLLQTQVVEV
GQDSQQRRDSVITARRHSSTSSTTGKVFLGSSRLYQELEELQHDMAVVQEVSLLVGTLHG
TYQNLNTTVSQDWCLALQRLIRLKVEEIQNANKCHLRLSIPGKPDKSGRPGSIVVVFKTP
SPLSKISWVNRLHLAKIAHRQENPPGWECAEEDVKTKAHFSYPLLTCKLPVFSSMTHSLK
LEAALHSPSQSSLLGFCIASTSLPQGYLWVAGGGSGFNHQVEIFSLNRATPRLVKTVPLR
APVLCLEYVKEPCPSTEEREAEKAQSAAQRGNIICVGLQDGSICVYSSVDTAVHCLSTLV
NPDGCPVLCIKHSPSFLFAGLADGKVAVYHRRAGERLWDVDSCRLVSVGSEPVCSLLTFE
DAVWASCASRVNVIQGSSLHTRSFTAHSDAGCSVSHMIRSGGGVWMAFTQGSSIHLFHTE
TLEPLQEVNISTHTAHLTPGQVCVSSLLICQGLLWVGTSQGIIVTFPVPTLEGIPKITGK
GMTSLNAHCGPVDLLVSTSSALASDLLKRDSILNSSEEGANREAEGGKGDEGGGEEGHRW
EQSSLPQDSAAPPPREEKPKRLLLQYRLHSTCQLPGKLLSVQPAQGTHRPPPESLVHSQG
FSIYEVCEDPDVWLRGRPVEWGKEGQVRCNKVTSTAVFSGGRGHRWIGQTSSPGPCSAST
DNTLLVWQLPLTLSQ
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccacagccacttctctgccgttcctcggtgtctctttctaatgaggcgtca
cacaaagaggaagatgcggatgaagaggagcagggggaggagtttgagtttgatgacatg
gatgacatgggacctccagagatgagttctggctctttgattaggagtgactggagagca
gacaccgcagtgtcaaacttttatgccaattcagacccggtccaggggacagcaatacag
gacatgcatggaacaaccaggactgggcagaagggccacaaccccgcactgtaccagcag
cactgctcagatatggaggtcagggagtccccagaagggtattccacctcctctgatctg
ggggtgactggagagtcagagagcttctggaaagcgaacagtatttatgaagaaaagtct
tcggcaggcggtcaggacaagtccggcagtgcaataaacgggtgcaactcccagcaggac
acggctgagaccggggtgccctctttagtcagcccacagactgaacatcacacagctgag
ataggcggacctgccaaccagagtccagacagtgttgtcagagacctcaaggtcatctat
gacgacgtgcctgctgagaaccttcagcacccagtggaagatgttgatgacatctacgag
gacatccagagacctgatcaccggggctccaacggctggagctccagtgagtttgagagt
tatgatgagctgtctgacagcgagagtgttcctccaccccgcagcagcagcaagctgcct
gcagacgtgctgaggctgaaggagcgttgtgctgtcaccaggagggagctggcggtgcgt
cttactccacctcatgttgcccacatcaaacagagctgtgacactaaggtgcagcagttg
atgaaagcagcgaggagtggtaccaggggcagtttagaaaagacaaagttagctatgatt
cgcaaagtgtcattcctgcagaaaaaagattccacaggtgagggaagggatgatgcaggt
tacctggatgtgtctgtgtgtgagttgaagcaccctccaccacaactgtgccccatgccg
gaggggctcagcagtcagcaggtggtcagacgtctcatcctcagctccattgtgcagagt
gagagcagctacctgaactctctcaagagaatcctccaggagtaccagaagcctttgttg
gagccacagaactggatcctaaaccccaagaaggtgcgtcacatcttttaccgtctgcag
gagatccatcagtgccattcaatgttccagatcgccttggcgtcccgcgtggccgagtgg
gatcacagcgagaccatcggagacctgtttgtcgcctcgttttcgaagtccatggtgctg
gaggtctacagtgactacatcaacaacttcaccaacgcaatgacactgatcaagaaggcc
tgcatgtctaaacctgctttcctggactttctgaagaagaagcaggcctcgagtccggac
agaatcactctgtacggcctgatggtcaaacccatccaacgctttcctcagttcattctg
ctgctgcaggacatgttgaagaacactccaaagatccacaatgaccggctgcccctgcag
ctggctctcactgagctggagactctggcagagaagctcaacgaacagaagcgtctggct
gatcaggaggctgagatccagcagttggcacacagtgtgggggaccgcaacctcagcaag
ctgctgaactcgggacagcggcagctgattcagtgtgaactcctcactgaaattgtttat
ggtgatgaaggtcaagttctcaagtcgaaggagcggaaggtgttcctcctcaacgacacc
ctgatctgtgccaatgttaacctgaagggtccccctgacatcagcagcctggttcctgtt
ggccctcagtacacggtgaagtggtgcgcccccctgctgcagactcaggtggtggaggtg
ggacaggacagtcagcagagaagggacagtgtcatcacagctagacgccacagctccacc
tccagcaccactggtaaagtgttcctgggttcttccagactgtaccaggagctggaggag
ctgcagcatgacatggctgtggtgcaggaggtgtcactgctggtgggcaccctccatgga
acctaccagaatctaaacaccacagtgtctcaggactggtgcctggctttgcagaggctc
atccgtctgaaggtggaggagatccagaatgccaacaagtgtcacctgcgtctgtccata
ccaggcaaacctgacaaatctggtcgtccagggagcatcgttgttgtcttcaagacaccc
agccccctcagtaagatctcctgggtgaaccggctccacctcgccaagatagctcacaga
caggaaaaccctcctgggtgggaatgtgctgaagaagacgtgaagaccaaagctcacttt
agttatcctctgttaacctgcaagcttcctgtcttctcctctatgacacactcactgaag
ctggaggcagctcttcacagcccgtctcagtccagcctgctgggcttctgcattgccagt
acgtctttaccacagggttacctctgggttgcaggtggaggaagcggcttcaaccatcaa
gtggagatcttctcgctgaaccgagccactcctcgtctggtcaagaccgtcccgctcagg
gccccggtcctctgtctggagtatgtgaaggagccatgtcccagcacagaggaaagggag
gctgagaaggcccagtctgcagcccagagaggaaacatcatctgtgttggcctgcaggac
ggcagcatctgtgtgtacagcagcgtggacaccgctgttcattgcctgtcgaccttggtg
aaccctgatggctgccccgtcctctgtattaagcactcgccgtctttcctcttcgctgga
ctggccgatggcaaagtggctgtttaccacagaagggctggcgagagactgtgggacgtg
gactcgtgcaggctggtgtctgtgggctctgagccagtctgcagtctgctgacatttgaa
gacgccgtatgggccagctgtgccagccgagtcaacgtcatccagggatccagcctccac
acacggagcttcacagcccattctgatgccggctgcagtgtgagccacatgattcgttca
ggcgggggggtttggatggccttcacccagggctcctccattcacctgtttcacactgag
accctggaaccactacaggaagtcaacatctccacccacaccgcccatctgacaccaggt
caggtgtgtgtctccagcttgctgatctgccagggcctgctgtgggtggggaccagccaa
ggcatcattgtcaccttccctgtgcccacactggagggtatccccaagatcacaggtaag
gggatgacgtctctgaatgcccactgcggtccggtggacctcctggtgtccacctccagc
gccttggcctccgacttgctcaaacgggactccatcctcaacagcagcgaggagggtgcc
aacagagaagcagagggaggtaaaggtgatgagggaggaggtgaagaggggcacaggtgg
gagcagagcagcctcccgcaggactcagcagctcctccaccaagggaggagaagcccaag
cgtctcttgctgcagtatcgcctccactccacctgccagctgcctgggaagctgctgtca
gtccagcccgcacaggggacccacaggccccccccagaatccctggtgcacagccaggga
ttctccatctatgaagtgtgcgaggaccctgatgtgtggctaagagggcggcccgtggag
tgggggaaggaggggcaggtcaggtgcaacaaagtcacctcaacagccgtcttctccggt
ggcagaggacaccggtggataggacagacgtcctcaccagggccctgctcggcctccact
gacaacacactgctggtgtggcagctgcctctgactctcagccaatga
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