Cyclopterus lumpus (lumpfish): 117733231
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Entry
117733231 CDS
T09199
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117733231 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117733231 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Laminin_II
DUF2959
F5_F8_type_C
EzrA
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117733231
NCBI-ProteinID:
XP_034392597
Ensembl:
ENSCLMG00005009606
LinkDB
All DBs
Position
7:complement(4123749..4162588)
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AA seq
1783 aa
AA seq
DB search
MHASLLTLVCVLAAAVGQEPDHSHGCAQGSCYPATGDLLVGREKSLKASSTCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIENVITTFKPLKSWWQSENGKSDVFVQLD
LEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQIYRYFSHDCATAFPRISQGPLRNIN
DVICESRYSDIEPSTEGEVIYRVLEPAIDIEDPYSPSIQNQLKITNLRVNFTKLHTLGDN
LLDPRAEIKEKYYYAIYELVVRGNCFCYGHASECAPIDGIRDGIEGMVHGRCVCNHNTKG
LNCEQCDDFHNDLPWKPAEGSSTNACKKCSCNGHSTQCHFDMAVYLAVGNLSGGVCDDCQ
HNTMGRNCEMCKPFYYQDPFRDIRDPRVCVACDCDPDGSQNGGMCDSHTDPSLGMVGGQC
RCKANVEGPRCDKCKTGFFGLSPHNPQGCQPCRCDHRGTVSGSSQCDPVSGDCFCKRLVT
GRSCDQCLPEHWALSHDLNGCRGCACDIGGALDNHCAMESGQCRCRSHMTGRQCTQVESR
YFFMALDHFLYEAELAKMGQGCTLETREHQPGRPATWTGIGFARAPEGGTLEFLISNVPY
SMEYDLLIRYESQMPRDWEEVRITVIRPGPIPTSSPCGNTIPDDDRLTVSLPAGARFVVP
PHIVCLERGVTYTLRFEFKRYHDANSILNGAANALLLVDSIALMPRHSSMEMFNAGDPAS
NNRKQAYERYRCHEGAKSVTRPLMSDTCAKLVTSMSAIVNDGALPCSCDPQGSMSSMCHV
RGGQCHCRPNVIGRRCDQCAPGTHGFGPSGCIACGCSLEGSVTRLCDKFTGQCQCRPGAF
GQRCDGCQAGHWGFPSCRPCQCNGHADKCDQRTGACVSCRDNTGGDKCDRCANGYYGNPV
LGKASSAQCRPCPCPDGPNSGRHFAASCYQDNRNRQIICNCNQGYTGGRCEECAPGYYGN
PSQPGGRCQPCQCNNNIDMSDMEACNRQTGQCRKCLYNTEGPNCGICKSSYFGDASRRNC
RKCTCNFLGTDRGQCMEREDCVCQRATGQCQCLPNVIGLPCDHCAPNHWNLASGRGCESC
GCDPNNSVTSSCNEFSGQCQCRDGFGGTTCTDCQENYWGDPGTQCRACDCDWRGIETSQC
NRVTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHKCFGDWDRIVQDLAVRTKTLAERA
HEIQTTGLTGAYEKAFRDLEEKLAQARGIVDARNATAAAVATLMELIEDLRAQIGETTDT
LNRLEGDLTIVQDSNSEASKELSALEREAKELNLTSEQLHRQLDILKNSNFLGAYNSIRS
SYNKSRDAERRANESTTTRPSTVSQSADTRRRTERLIAAKKDDFNRKNAANKRALGDLNT
RAQGLDLKKINEKVCGAPGDAPCGESPCGGAGCRDDEGNRHCGGLNCNGAVAVADNALER
AKHAEKQLNKAMGEVEGLFSKVADAKTRAEEAKGKAQAALDKATATKNKVERSNNDLRDL
IKQIRDFLTQEGADPDSIEAVANHVLELSIPASPLQIQHLADEIKERVRSLSNVDAILQQ
TQDDVRKAERLLLDAKRARHSAEGVKTTAETVKQALMDAQTAQTSAEKAIARAKADIGVT
EARLVQIESETSNSEKDLNEAMDRLGTLGREITALKNKRANNSMAAARAEETATMARDKA
NEAKQILDGQLTDKYHEVQQKVDTKAKAVQDAKKRAESLRDEAKELLRDAQNKLQRLAEL
EKNYEENQKRLEGKARQLDGLEDKMKAILSDINKQIQIYNTCQ
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcccttctaacgctggtctgcgtcctggctgctgctgttggccaggagccc
gaccacagccacggctgcgcccagggcagctgttacccagcaacgggggacttgctggtt
ggacgagagaagagcctgaaggcctcgtccacatgcgggatgaggagaaaagagccctac
tgcattgtcagtcatctgcaggatgagaagaagtgtttcgactgtgactccaggcggccg
tacgacccggtgtacaacaccatcaatcaccggatagagaacgttatcaccaccttcaaa
cccctgaagtcctggtggcagtcggagaacggaaagtcggatgtctttgtccagctggat
ctggaagcagagtttcatttcactcacctgattatgaccttcaagaccttccgtccggca
gccatgctgatcgagcgttccgcagattttggtcgcacctggcagatctaccgctacttt
tcccacgactgcgctactgcctttcccagaatctcccagggtcctttgcggaacatcaat
gacgtcatctgtgagtcgcgctactccgacattgagccgtcaacggagggagaggtcatc
tacagagtgttggagccagccatcgacattgaggacccgtacagcccgagcatccagaac
cagctgaagatcaccaacttgagagtgaacttcaccaagcttcacacactgggagacaac
ttgctggacccccgagctgaaatcaaagaaaagtactactacgccatctacgagctcgtc
gtacgcggaaactgcttctgctacggccacgcctccgagtgcgcccccatcgacggcatc
agggacggcatcgaaggaatggttcacggcaggtgtgtgtgcaaccacaataccaaaggt
ttgaactgtgagcagtgtgacgacttccacaacgacctgccctggaaaccagccgaggga
agcagcaccaacgcctgcaagaagtgttcctgtaacggccactcgacccagtgccacttt
gacatggcggtgtatttggctgtgggcaacctcagcgggggagtgtgtgacgactgtcag
cacaacaccatggggcgcaactgtgagatgtgcaaacccttctactaccaagaccccttc
agggacatcagggacccgcgggtctgcgtcgcgtgcgactgcgatcccgatggctctcag
aacggagggatgtgcgacagccacacggacccgtccctcggcatggtgggaggtcagtgc
cgctgcaaagccaatgtggaggggccgcgctgcgacaagtgtaagacgggcttcttcggc
ctgagcccccacaaccctcagggctgccaaccctgccggtgtgaccacaggggaaccgtg
tcgggcagctcccagtgcgacccggtcagtggagactgcttctgcaagcgtctcgtcact
ggacgcagctgcgaccagtgtttgccggagcactgggctctgagccacgacctcaacggc
tgccgaggctgcgcgtgtgatatcgggggagccctggacaaccactgcgccatggagagc
ggtcagtgtcgctgccgcagtcacatgacaggacgccagtgtactcaggtggagtccaga
tatttcttcatggctctggatcacttcctgtatgaggccgagttggccaaaatggggcag
ggctgtacattggagaccagggagcaccagccgggtcgccccgccacatggacgggcatt
ggattcgcccgggcacccgagggcggtaccctggaattcctcatcagtaacgtcccctat
tccatggaatatgacctgcttatccgctatgagtcacagatgccacgagactgggaggag
gtgcgaataacagtgatccgtccggggccgattccaaccagcagcccctgtggaaacacc
atcccagatgatgacagactcaccgtctccctgccagccggagccaggtttgtggtccct
cctcacattgtgtgtctggagagaggtgtgacttacaccctgcgctttgagttcaaacgc
taccatgacgccaacagtatccttaacggagcggccaacgctctcctccttgtggactct
attgccttgatgccgcgccactcctccatggagatgttcaacgcgggcgatccggcttcc
aacaacaggaagcaggcttatgagcggtaccgctgccacgagggggcaaagagcgtgaca
cgcccgctgatgagtgacacctgtgccaagctagtcaccagcatgtcggccatcgtaaat
gacggggctctgccttgtagttgtgatcctcaggggtccatgagctccatgtgccacgtg
cgcgggggccaatgtcactgcaggcccaatgtgattggtcgacgctgtgaccagtgtgct
ccgggaactcacggctttggaccctcaggctgcatagcctgcggttgcagcttggaaggt
tctgtgacgcgactttgcgacaagttcaccggtcagtgccagtgccgtcccggagcgttt
ggtcagcgctgcgacggatgccaggcgggccactggggcttccccagctgcagaccgtgc
cagtgtaacggacacgccgacaagtgcgaccagaggaccggagcctgcgtcagctgcagg
gacaacactggaggagacaagtgtgacaggtgtgccaatggttactatggtaacccagtt
ttgggtaaagcatccagtgctcagtgtcgcccatgcccctgtccagacggccccaacagt
ggacgccactttgctgcgtcttgttaccaggacaaccgtaacagacaaatcatctgcaac
tgtaaccagggctacacaggaggccgatgtgaggaatgtgctccgggttactacggcaac
ccctctcagcccggagggcgctgccagccgtgccagtgtaacaacaacatcgacatgtcc
gacatggaggcttgcaacaggcagaccggacagtgcaggaaatgcctttacaacaccgag
ggccccaactgtggcatctgcaagagcagctatttcggcgacgcttcccggcgcaactgc
aggaagtgcacgtgtaacttcctgggtactgaccgtggccagtgcatggagcgtgaggac
tgtgtgtgccagcgagcaacaggccagtgccagtgtctgccgaacgtcatcggtctgcca
tgtgaccactgcgcccccaaccactggaacctggccagcgggaggggctgtgaatcctgc
ggctgtgatcccaacaactcagtcacctcctcatgcaacgagttctctgggcagtgtcag
tgtcgcgacggcttcggcgggacgacctgcacagactgtcaggagaactactggggagac
cccgggacacagtgcagagcctgcgactgcgactggcgaggcatcgagacctcgcagtgc
aaccgggtgaccggccactgtgtttgccagcagggggtgtcgggtgtccgctgtgaccag
tgtgccagaggcttctctggccagttccccaactgtcagccctgtcacaagtgcttcggg
gactgggatcgcatcgtgcaggacctggcagtgcgcaccaagactctggcggagcgggcc
cacgagattcaaaccactgggcttactggggcctacgagaaggccttcagggacctagag
gagaaactggcacaagctcggggaattgtggatgcacgcaacgccactgctgcagctgtt
gctaccctgatggagcttattgaagatcttagagcgcagatcggtgagaccaccgacacc
ctgaaccgtctggagggagacctcaccatcgtccaggacagcaactctgaggcaagcaag
gagctgagtgctctggagagagaagctaaagagctaaacctcacttcggagcagctacac
cgccaactagatatcctaaaaaactcaaacttcctaggtgcgtacaacagcatccgtagc
tcctacaacaagtctcgtgatgcggagcgccgcgccaatgaatcgacaaccacccggccc
agcacggtcagccaatctgcagacactcgccgccgcaccgagcgcctcatcgccgccaag
aaggacgacttcaaccgcaaaaacgccgcgaacaagcgtgcgctcggagacctcaacacc
cgagcgcagggcctggacctcaagaagatcaacgagaaggtttgcggcgccccaggtgat
gccccctgcggggaaagcccttgtgggggtgcaggttgccgcgacgatgaagggaaccgt
cactgtggaggcctaaactgtaacggcgctgtagcggtagccgacaatgccctggagaga
gccaaacacgcagagaagcagctgaacaaagctatgggagaggtcgagggactctttagc
aaggtggcagacgccaagaccagagcagaggaggccaagggtaaagcccaagcagctctg
gacaaagccaccgccacgaagaacaaagtggagcgctccaacaacgacctgagagacctc
atcaagcagatcagagacttcctcacccaggaaggtgcggatccggacagcatcgaggcc
gtggcgaaccacgtgttggagctctccatccctgcttcgcccctccagatccagcatctg
gctgatgaaatcaaggagcgcgttcgcagcctttcgaacgtggacgccatcctgcagcag
acgcaggacgatgtgcgcaaggcggagcgactgctgctggatgccaagagggcgaggcac
agtgctgagggcgtgaagaccacagcggagacagtgaaacaggccctgatggatgctcag
actgcccagacatcagcggagaaggccatagcgagagccaaggcagacattggggtgact
gaagcccgactggtacagattgagtcggaaacatccaacagtgagaaggacctgaatgaa
gccatggaccgcctgggcacgttgggacgggagatcaccgccctgaagaacaaacgggcc
aacaacagcatggcagccgcccgagctgaagagacggccaccatggcacgagacaaggcg
aacgaagccaagcagattctagatggccagctgacggataaataccatgaggtccagcag
aaggttgacacaaaggccaaagctgtgcaggacgccaagaaaagagcagagagcctcaga
gatgaagcaaaggaactactgagagatgcccagaacaagctccagaggctagcagagctg
gagaaaaactatgaggagaaccagaagaggttggaggggaaagctcgtcagctggacggc
ttggaggacaagatgaaagccatcctcagtgacatcaacaaacagatccagatctacaac
acgtgccagtag
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integrated database retrieval system
