Cyclopterus lumpus (lumpfish): 117733246
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Entry
117733246 CDS
T09199
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecule (CAM) interaction
clum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117733246 (nfascb)
04517 IgSF CAM signaling
117733246 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117733246 (nfascb)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
L1 family
117733246 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Fn3_ROS1
Pur_ac_phosph_N
Ig_PDGFR_d4
V-set_CD47
C1-set
BiPBP_C
DUF6724
Motif
Other DBs
NCBI-GeneID:
117733246
NCBI-ProteinID:
XP_034392623
Ensembl:
ENSCLMG00005016008
LinkDB
All DBs
Position
7:complement(19877696..19888644)
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AA seq
1179 aa
AA seq
DB search
MGILVEPALLLVLWQSVWALDIPLEIRQPPAIIKQSMKEHIVDPKDTMVIECEARGNPHP
IFSWRRNGKYFNVARDSQTSMRRRSGTLDIYAWNNPEQYEAEYQCIASNEYGSAYSNKIR
LRLYRPPVWPREVLEPVVVSAGLPLVLSCDPPRGPPKPDTYWMSSCSYARPFNWPVQTAF
PTMQPVRPDRRVSMGVNGDLYFSNILFNDSAADYCCNARFPYKNVIQQKMPVVVKVLTTR
TVAEAAPTWLSPTGSSSSILVLQGEELLLECIGAGVPTPGITWTKNGDDLVVSPRMKVKN
FNKMVQIPKASFDDAGEYTCTATNKIGYIEHTITVRVKAAPFWLEKPTDLVLAPEENGRL
LCHSDGAPRPTVSWFINGEPIETATPQPNRQVSGDTLTLRSVTTANTAVYQCNVSNQFGY
LMANAFVNVLHATPRIIGPRNELIKVIEGSRTLLDCRYFGSPVPELRWSKYGQGTLEGNR
FKTQGNGTLEIKNIQIEDQGTYVCVVSNVAGRDESQVRLEVKEPTLIVTRPQSMKVIRGS
DVRFECVVKADATTPVTTTWMKGKKHVTLGWRISLDESNLVITNVNGGDEGNYTCVIKSE
LDQKYASARLMVMDRPDPPSKLELSDPYERSVRLSWVPGDSNHNHITEYLVQYDDDDWLP
GKWRNLSTYPGNLNSVILHLTPFTYYEFRVIAINEIGMSRPSRPSMRFQSSGAPPDIIPK
NVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWKRRDSREEWKNATTKWLRYYIYDAD
TFTPYDIKVQAVNDFGLGPESPVAIGYSGEDRPLTAPLNLRVSDIESTQVTLHWDSVTRG
SMMGDLKEYKAYYWRDSSQLRWLRVNRGMKSKAFPDNDPEPSGVLTGLIPYSNYKLYIVV
ANNRYEGPPGNNIHFSTPEGVPSVPRSFRIQQRHLDSIYVDWDLPAEPNGVIIGYSLKYQ
TVNATRGEESRVEEFTPNVTSFSVRRYDRYTRYRFSVAAQTRIGIGEWHTEESPHYTTET
YAQDQVDISTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVREKKDISLEPVDDNDQ
EGSFDYRSLERIARISTLPYPRREEERGLQRGQLSMDAMMKRSDSDDSLVDYGDGGEIPF
NEDGSFIGQYTGTRRDVRELDFGGNLELHSPMNTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggatactggtggaaccagcgctgctccttgttttatggcagagtgtttgggctttg
gacatccctctggaaatcaggcagcccccggccatcataaagcagtcgatgaaagagcat
attgttgaccccaaagacaccatggtcatagagtgtgaagccagaggaaaccctcatccc
attttctcatggagacgtaacgggaagtatttcaacgtggcacgtgactctcaaacttcg
atgcggaggcgttcagggactctggacatctacgcctggaacaatccagaacagtacgag
gcagagtatcagtgcattgcctccaatgagtatggatctgcatattccaacaagatcaga
ctacggctatacagacctcctgtttggccaagggaggttctggagcctgtggtggtcagc
gctggcttgcctctggtcctgtcctgtgaccccccacgaggcccgccgaaacctgacacc
tactggatgtccagctgctcatacgcgaggcctttcaactggcccgttcagaccgctttc
cccaccatgcagccggtgcgaccggaccgccgggtgtccatgggagtaaacggagatctg
tatttctctaacatcctgttcaacgactctgctgctgattactgctgtaatgcccgcttc
ccctacaagaatgttatccagcagaagatgccggtggtcgtcaaagtgctgacaactcgc
acggtggccgaggctgcccccacctggctgtctcccacaggatcatccagctccatactg
gtcctgcaaggggaagaacttctcctggagtgtatcggtgcaggagtgccaactcccggt
attacatggaccaagaatggtgacgacctcgtggtatcgcctcgcatgaaagtaaagaac
ttcaacaagatggttcaaatcccaaaagcatcttttgatgatgcgggagaatatacttgc
accgctaccaataaaattggatacattgagcacacaataaccgtcagggtcaaagcggcc
cccttctggctggagaaacccactgatctggtcttggccccggaggaaaatggacgcctg
ttgtgtcattctgatggagctccgcgtcccacagtcagctggtttatcaacggggaacct
attgaaactgctacacctcagcctaacagacaggtgtcaggagacacactgactttacgc
agtgtgaccactgcaaacactgcagtctatcagtgcaatgtttccaatcagtttgggtac
ttgatggccaatgcttttgtcaacgtgctgcatgcaacgccacgtattattgggcccagg
aatgaactcatcaaggtgatagagggcagtcgtaccctccttgactgccgctactttggt
tctccagtacctgaattgcgatggtctaaatatggacagggtactctagaaggaaatcgt
tttaagactcaaggtaacgggactctggagatcaaaaacatacagatagaggaccaggga
acttacgtttgtgtagtcagcaacgtcgcaggaagagatgagagtcaagtcagattagag
gttaaagagcccactttaattgtcacaagaccacagagtatgaaggtcatccgtggaagt
gatgtgcgctttgagtgtgtcgtgaaagcagatgcaacgactcctgtcacaaccacctgg
atgaaaggcaaaaagcacgtcactctcggctggaggatttctctggatgaatcaaatctg
gtcatcactaatgtaaacgggggtgatgagggaaattacacctgtgtgatcaagagtgag
ctggaccagaagtatgcttcagcacgcctgatggtgatggaccgtccagatcctccctcc
aagttggagttgtccgatccatacgaacgtagtgtaagactcagctgggtgcccggagac
agcaaccacaaccatataacagagtacttagtgcagtatgatgatgatgactggttgcct
ggtaagtggagaaacctttcaacgtatccagggaacctcaactctgtcatcctgcatctc
acacctttcacctactacgagtttcgggtaatcgccatcaatgaaatcggaatgagtcgc
ccgagtcgtccatccatgcgcttccagagcagcggtgctcccccagatattatcccaaag
aacgtaaagggtgtgggtacatggaggaataacatggagatcagctgggagcctctgacc
tacagagagtggaacgggccccacctgaagtatctggtgtggtggaaaaggagagattcc
cgagaggagtggaagaatgcgaccaccaaatggctgagatactacatctacgatgccgat
accttcactccgtatgacatcaaagtccaggctgtcaatgactttgggctgggtccagag
tctcctgttgccattggttactctggcgaggaccgtcccttaaccgcaccactgaacctg
agagtgtccgacatcgagagcactcaggtgactttgcactgggattcagtcacacgcggc
tcaatgatgggcgatctgaaagaatacaaggcctactattggagggacagcagccagctg
aggtggctgagggtcaatagagggatgaagtcgaaagcgtttccagacaacgatccagag
ccctctggggtcctcactggactcatcccctatagcaactacaagttgtatatagtcgtg
gcaaacaatcgatatgaagggccgcccggtaacaatatccacttctcaacgcctgaggga
gtaccatctgttcccagatctttcaggatccaacagcgacatctagacagtatttatgtc
gactgggaccttccagctgaacccaacggtgtcattattggatattccctcaagtaccag
acagtgaacgccaccaggggagaggagtctcgagttgaggagttcactccaaacgtaaca
agtttctcggtcaggcggtacgaccgctacactcgttacagattctctgtggcggcacaa
actcggatcgggataggggaatggcatacggaggagtcgcctcactacaccactgaaacg
tatgctcaggaccaggtggacatctccactcagggctggttcatcgggataatgtgtgca
gtggctctcatcgtgctcatcctactcatagtctgcttcatcaagaggagccgagggggg
aaatacccagtacgggaaaaaaaagatatttcattggagccagtggatgacaatgatcag
gagggatcattcgactacaggtctcttgaaaggatagcgcgtatctccactctgccttac
ccccggcgagaggaggaaaggggacttcaaagaggccagctgtccatggatgcgatgatg
aagcgatcagacagcgacgacagtctggtggactatggcgatggaggcgagataccgttc
aacgaggacggctcgttcatcggccagtacacaggaaccaggagagacgtcagggagttg
gactttggtggaaatctggagcttcactctccaatgaataccatctactccctggcgtaa
DBGET
integrated database retrieval system