Cyclopterus lumpus (lumpfish): 117733257
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Entry
117733257 CDS
T09199
Symbol
dtx3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117733257 (dtx3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117733257 (dtx3)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117733257 (dtx3)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117733257 (dtx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-RING_4
zf-RING_10
zf-RING_6
zf-C3HC4_4
RING_XB3-XBAT31
Prok-RING_4
Baculo_IE-1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117733257
NCBI-ProteinID:
XP_034392650
Ensembl:
ENSCLMG00005021965
LinkDB
All DBs
Position
7:12414882..12428899
Genome browser
AA seq
369 aa
AA seq
DB search
MGSQVSSDEMSVRAGQGSDEVLVSQAVWDYLAAAGRPWLIDFQHKQGMSAGIIRRGERGG
CCAVRLQPVEGSRNGGAGVMDGPISSETRKAFIDLCRCARKEMSKQDGGPKRKRALLPCV
GVLEPNGEGSLLQPPPPQPRPSQRQQQRFRKPADEEACAMLHEAAQRKDMDSSLASHNEA
EDNSTCSICIGDIVEKTTLERCGHSFCRSCLDQAFKVKKACPVCRLVYGQLIGNQPANGT
MIVERDSDLELPGHEGNGCICIIYSFPPGLQAPEHPNPGVRYSGTDRVAYLPGGPEGDRV
LGLLRRAFEQRLIFTIGTSMTTGIQNVITWNDIHHKTSIWGGPRCFGYPDPTYLVRVTEE
LREKGITAD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggatcacaagtttcctctgatgagatgagtgtgcgtgctggccagggcagtgatgag
gtgctggtttcacaagcggtgtgggattacctggctgcagctgggcggccttggctcatt
gacttccagcacaagcaggggatgagtgctggtatcattaggcgaggggagagggggggc
tgctgcgccgtgaggctgcagccggtggagggctccaggaacggtggagctggtgtgatg
gatggacccatctctagcgagacacggaaagctttcattgacttatgccgctgcgcccgc
aaagaaatgagcaaacaggacgggggacccaagaggaagagggctctgctaccctgtgtg
ggagtcctggagccaaacggagaggggagcctgcttcagcctccacctccccagcctcgg
ccttcccagagacagcagcagaggttcaggaagcctgctgatgaggaggcctgcgccatg
ctccacgaggcagcccagaggaaggacatggactccagcttggcttcccataatgaggca
gaggacaacagtacttgttcaatctgcattggggacatagtggagaagactactttggag
aggtgtggccattcattctgtcgctcttgtctggatcaagcctttaaggtgaagaaagcg
tgtcccgtgtgtcggctagtgtacggacagctcattgggaaccagcctgccaatggtaca
atgatcgtagagcgagattctgatctggagcttcctggccatgaaggcaatgggtgcatc
tgcatcatctacagcttccctcctggcctacaggcgccagaacaccccaacccaggtgtt
cggtactcaggaacagaccgcgtggcctacctccctggcggccctgagggggaccgtgtg
ctgggactgctgcgacgggcctttgaacagcgccttatcttcaccatcggtacctccatg
actacgggcatacaaaatgtcatcacctggaatgacattcaccacaagacctcaatatgg
ggcgggccccgctgttttggctacccagaccccacttaccttgtgcgagtgacagaggag
ctcagagaaaaaggcatcacggcagactga
DBGET
integrated database retrieval system
