Cyclopterus lumpus (lumpfish): 117733285
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Entry
117733285 CDS
T09199
Symbol
asxl1
Name
(RefSeq) polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117733285 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117733285 (asxl1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117733285 (asxl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
117733285
NCBI-ProteinID:
XP_034392702
LinkDB
All DBs
Position
7:complement(880965..897302)
Genome browser
AA seq
1591 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKDSIFFKLPGRMSLFTLKKNALQWTKATSESETPAEPASSTTALASSSSTA
AAGTGSASVGPTEAAEQESCDSTEITAAASGDNDASVDESSSSASCSTELQTPSTQPQTR
LSRAAGQQGRTDTQQTQHAQHTQTRLSRSRQSGRQRKKAVMMPRVVLTPLKVNGEHVPSG
PMKRSRGGVDVDFETPGSILVNTNIRALINVRTFSAFPTHSQQQLLQLLPEVDRQIGPDG
MARLSSSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYH
GQKSGLTQEESLKLTVSEASEVAASGLDSDAAVVATGAPKRRSVGRRRRDGRMRRRTRAD
LRRRARRTLCKATPPALQSAEAAEGGAALDSPAASIGSPMSDNAVVTGEVVLQAECGVEL
SAESASIEPKASTTPEPVTLPVTLPASTRTRTPTPTPTPTPTPTPTPTPTPTPTPTPTPT
PTPTPTPTPSPASNSANEEPEAVTRLLPEEAPPVLASTSSPSSSSSSSSSSSSSSSSSSS
SSSSASSPVSSPSSPSDRQGAFVAGLDSSSSSSASSATVAADPLDDTASVVTSITGGTAT
SSRDSSPSASPATTPLPSAQLKEQKRRPDETQAFSSFPEKRPRLDDRQSFRTTIDSVRSE
KLQPTTEEPKVPPIRIQLSRIKPPWVKGHPTYQICPRIVPPGEGSRRSGTGGARTLADIK
ARAQQARAQREAAAAVAATGEGAGPAGVRLRPASGLPDSSNGRRAREHPGPIEPGGGGGG
PGGGGGGRRGGGGMEEQGLSSSTNSSGTQLQLLNVEPTPQPSPSLSFTSTSMSLEPPHTP
SPPQEEAAGGSEALEEVETTSASVQSSSNELTDEAAHSPSPKPEEPKSAVAPSEMADKGS
EKPSLAPTSIPDSLPRFGAQGVDVIQTLSSSCKSKEQMQGKEAGLGGVIQHGSYHLEPQE
VFSHSASERRKMDISSPQHADSGGEKDDEAGTHSDSTETASDCENDIQEDEQQQPDEDWS
PQVSIKRNGQLVLCSPPSQNQQPVIQAHVSSRHGQTVIQPCFPNGLSHPQHSSSHYQNHQ
SFPTAHTQGLRDISAVVKMEPGEDCNISRESSTEEECRGSLKPSVTHPTVAGASKRLASS
VRPVSSVEANNPLVTQLLQGSLPLEKVLPSHSANRLEISRLQGPQARPPVARTPGPRNRP
EVSAQSSSPELGAASRINNQSPTGCPVSCLKEAPAGPQYKSQQAPGAVPVITSLPPSSSS
SSFRSKSELSSQIAVESAVIKNAHGSQPSPGVAPDRLAHRTMPNGPSPSCADPCPTEVVP
TIKINWRPSHTQPHLSHQLQLSPAPTVKNEVGVRPPCQALAKSSPIKPMSITKKEPGGSV
DGYLSGGAMEGLLNMEMTLARMAKKEHSKVTYSSGSPSSSPSPSALPFQLYGKFPKHGGV
GGVSYTANVSVMDNSGFSRSMADSVLQLRPRLASSQTTLSIQAFTDSTAEEVALKCSCRL
KAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacaaaagagaaagaaggagcggacctgggctgaggcagctcgcatggtt
ttggagaacttctcggatgcacccatgactcccaaacaaatcctccacgtcatccagacc
aaggggctgaaggaaatgcggagtggtacagcacccttggcctgcctggtcaccatgctg
cactcccaggtgaggggagaccgagtcaaggacagcatcttcttcaagcttcctggacgg
atgagcctgttcactctcaagaaaaacgccctccagtggacaaaggcgacgtcggagtcg
gagacgccagctgagccggccagcagcaccaccgccttggcttccagcagcagcacagct
gcagcaggcacggggtcggcctcggtcggccccactgaggccgctgagcaggaaagctgc
gactccacggagatcaccgccgctgccagtggagacaatgacgcctcggtggatgagagc
tcgtccagcgcatcctgctccacagaactgcagactcccagcacccagccccagacccgc
ctcagcagggcagcaggacagcaaggacgcacggatacgcagcagacccaacatgctcag
cacacccagaccagactgagccgctccagacagtcggggaggcagaggaagaaagcagtc
atgatgcctcgtgttgtccttacccctcttaaagtgaatggagagcatgtcccttcaggg
cccatgaagaggagtcggggaggggtggatgtagactttgaaacaccaggctccatccta
gtcaacaccaacatcagagccctcatcaacgtgcggaccttctcagccttccccacacac
tcgcagcagcagctgctgcagctcctgccagaggtggaccgtcagattggaccagatggt
atggctagactgagtagctcagctctcaacaatgagttcttcacccatgcctcccagagc
tggaaagagaggctggcagagggtgagttcacccacgagatgcaggtgcgtttccggcag
gaaatggagaaagagaagaaggtagaggcgtggaaggaaaagttttttgaagagtaccat
gggcaaaagtccggcctgacacaagaagagtctctaaagctcaccgtgagtgaagccagt
gaagttgcagccagtgggctggacagtgatgcagctgtggtggcaaccggtgcgcccaag
agacgcagcgtgggtcggcggaggagagacggcaggatgaggagacgcacacgggctgac
ctacgtcggcgggcccgccggaccctctgcaaggccactcctccagccctgcagtctgca
gaagcagctgagggtggtgctgcactggacagcccggcagcttctattggctctcccatg
tccgacaacgcggttgttactggggaggtggtactgcaggccgagtgtggcgtggagctt
tcagctgagagtgcctccatagagccaaaggcctctaccactccagagccagtcacattg
ccagtcacattgccagcctccactcgtacccgtacccctacccctacccccactcctact
cctactcctactcccactcccactcctactcccactcccactcccactcccactcccact
cccactcccactcccactcctactcccagcccagcctccaacagtgcaaacgaagagcct
gaagcagtgacccgcctgctcccagaggaggctccacctgtgctggcatccacctcctca
ccatcttcttcctcctcttcctcctcctcctcttcttcctcctcctcctcctcctcctct
tcttcttcgtctgcttcctcgcctgtttcctcaccctcctcaccttctgatagacaggga
gcgtttgtcgcaggcctggactcttcttcatcctcctcagcgtcaagtgccacagtcgct
gccgatccgctggatgacactgcctctgtggtcacctctattacaggaggtaccgccacc
agtagccgtgacagtagcccctcagccagcccagccaccacccctctgcccagtgctcag
ctcaaggaacagaagagaagaccagacgagactcaggccttctccagcttccccgaaaag
aggccgcggcttgacgaccgtcagtcctttcgtaccacaattgacagtgtccgttcagag
aagctgcagccgacaacagaggagcccaaggtgccgcctatccggattcaactgtccaga
atcaaacccccctgggtcaaaggtcaccccacctaccaaatctgcccccgcatcgtgccc
cccggcgaaggctcgcggcggtcggggacagggggcgcgcgcaccttggcggacatcaaa
gcccgggcccagcaagcccgggcccagcgcgaggccgctgctgctgttgcagccactggc
gaaggggcagggccggccggcgtcaggctgcggcctgcttctgggctaccggatagcagc
aatggacgaagagcgcgagagcatccaggacctatcgagcccggaggaggaggaggggga
ccaggaggagggggaggtggaagaaggggaggtggtgggatggaggagcagggattgtct
tcaagcacgaattcgtctggaacacaactacagcttctcaatgtagagccgacaccccag
ccatccccttcattgtcctttacctcaacatccatgtctttggagcccccacatacccca
agccctcctcaagaggaagcagctggggggtcagaggctctagaggaagtagaaacaaca
tcagccagtgttcagagttcctccaatgagctcacagatgaggcagctcactcgccctct
ccaaagcctgaggagcctaagtctgctgttgccccatcagagatggctgacaaaggttct
gaaaaaccctcactggctccgacttccatcccagattcccttcccaggttcggggctcag
ggtgtggatgttattcagacgctgtcaagctcctgtaaatccaaagagcagatgcaaggg
aaggaggctgggctgggtggcgttatccagcatggttcctaccacttggaaccccaggag
gtattctctcactcagcttcagagagacggaaaatggacatatcctctccccaacatgca
gactctggtggagagaaagacgacgaggctgggacacatagcgactccacggaaacagct
tcagactgtgagaatgacatacaggaggacgagcaacagcaacctgacgaggactggtcc
ccccaagtgagcatcaagagaaatggccagctggtcctctgcagccctccttctcagaac
cagcagccagtcatccaggcccacgtttccagccgtcatggtcagactgtcatccaaccg
tgcttccccaatggcctgtctcaccctcagcacagtagctctcattaccagaaccaccag
tctttccccacagcccacacacaggggcttagggacatcagcgccgtggtcaaaatggag
cctggggaggattgtaacatctccagagagagctctactgaagaggagtgtcgtggaagt
ttaaaaccctctgtcactcacccaactgttgcaggtgcctccaagagactggccagctca
gtcagaccagtatctagtgttgaggccaacaaccctttggtcactcagctcctacagggc
agcctgcccctggagaaagttctaccctcacactctgccaacaggctggagatcagcaga
ttgcaaggaccccaagccagaccaccagtggcaaggaccccagggcctcgcaacaggcct
gaggtttcagcccagtcttctagcccagaacttggtgcagcttctcggatcaacaaccag
tctccaacaggttgcccagtgtcctgtttgaaagaggccccagctggaccgcagtacaag
tctcagcaggctcccggggctgtcccggtcatcacctctctgccaccgtcctcatcctcc
tcatccttcagaagtaagtcagagcttagttctcagattgcagtggagtctgcagttata
aaaaacgcacatggttctcagccctccccgggggtcgctccagacaggctggcccaccga
accatgcctaatggcccctctccttcctgtgcagacccgtgtcccacagaggtggtgcct
actattaagatcaactggcggccctcacatactcagccccacctctcacatcaactgcag
ctgtctcctgcacccacagtaaagaatgaagtaggtgtgcggcccccttgccaggcactt
gccaaatcgtcccccattaaacccatgagtattaccaaaaaggagccggggggctcagtg
gacggctacctgagtggaggggcgatggaggggctcctcaacatggagatgactttagcg
aggatggcaaagaaggagcacagcaaagttacttactcctccggctctccctcctcctcc
ccctccccctctgctcttcccttccagctgtatgggaagttccccaagcatgggggtgtt
ggaggagtaagctacactgccaatgtttcagtgatggacaatagcggtttctcccggagc
atggcggacagtgtgctccagctgcgcccccgcttggcctccagccagaccaccctcagt
atccaggcctttactgacagtacggctgaagaggtggcgctcaagtgctcatgccgcctc
aaagccatgatcatgtgccaaggctgcggtgccttctgccatgacgattgcatcgggccc
tccaaactgtgcgtgtcgtgtctggtggtgagatag
DBGET
integrated database retrieval system
