Cyclopterus lumpus (lumpfish): 117733316
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Entry
117733316 CDS
T09199
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clum01001
]
117733316
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117733316
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117733316
Protein kinases [BR:
clum01001
]
Serine/threonine kinases: Other
Other
117733316
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117733316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR19_1st
WD40
ARM_PUB
WD40_Gbeta
LisH
ANAPC4_WD40
LisH_PAC1
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
117733316
NCBI-ProteinID:
XP_034392753
Ensembl:
ENSCLMG00005006838
LinkDB
All DBs
Position
7:22799772..22816981
Genome browser
AA seq
1541 aa
AA seq
DB search
MASASPSVDSKAELTSLLEQWEREQQGSTQELVSILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNTLVNSYVMTSREFPLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRM
RELQDKDAENKRDIKRPSPRKSLSEPLLPLDEETVDGGFEEKPFTPGRNGAEKEGPEEDG
EIPFSTAEPENELSFRLNSPHKAGGRANSAVKTMMKPMSAPGSLTHQGVSDGGSYLKRKA
ERESGRTLKQKLNFSLPDPDRNFSELSNSSWSETSPWVIGNNYHLFPLTPEIEQRLILQY
LTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVA
HGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLECSH
ASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLSDDEIFSS
RQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEMME
FLIEYGPLGLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILTVV
PKTQLLLSEAVAVLDEGGSTVSTVGMSIVLAVAEGEVFVNDADIQKSALQVVTNCVCAPD
KRMSSIGKFIAGTPRRRLPQQSKASESVLTKMWNVVQSNNGIKVLLSLLTVKMPITDADQ
IRALACKALVGLSRSTSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAELI
ERISGKPLLIGTDVSLAWLQRASVVAKSRISFPEKELLLLIRNHLVAKGLHDTATALTKE
ADLPMACLSLATHAASGFPPVAPPPPASPVATLPRTPRLANGVVSRLASHAPHSTSPGSS
NLQTRPSTSQPAAASAAAAAAFPSTSTSPCSNGSPLIGRIVFSRERLAGYATASCKKPRV
LRQKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTP
HQCPEPKQRRQAPINFPSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREAEEDES
GFMCCAFSARERFLMLGTCTGHLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSA
SWSFSLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQVTLTL
NNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVI
VNTEIWDLRTFHLLHMVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMELQMKSPLGSSF
RTFNATGYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEE
EEEDEEDQEDDDQEEDDDDDEDSGDTDPLIAELENDDDDDEEEEEDDDGNDEFSPSDEEV
SRLLEGGGDDEDDSDNGDQALLYDSSDNSDLEDDIILSLNQ
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcttctcccagcgtggactccaaggccgagctgacttctctgctggagcag
tgggagagggagcaacaaggcagcacccaggagctggtcagcatcctcacaaaaatctca
gagctggtggagaaagagacggaagagtaccacaaagcggaccccgacccctttgatgac
cgacacccggggagagccgacccagagtgcgtgttgggacacctgctcaagatcctgttc
aagaacgatgacttcatgaacacgttggtgaatagctacgtgatgaccagcagagaattt
cccctcaacgcggccgcttgtcgcctgcttcagaacatcatgcccgggctggagacggcc
gtggtcttccaggaaaaggagggcatagttgaaaggctgtttaagtgggcccaggaggcc
gagcagcccctccgaatctacgccaccggcctgttggccggcgccatggagaaccaggac
atcgccgccaactacagggaggagaactccgttttggtgcctttgatgctgcatcggatg
cgcgagcttcaggataaggacgccgagaataaacgggacatcaagcgaccgagccccagg
aagtctttgagcgagccgctgctgcctctggacgaggagaccgtcgacggaggcttcgag
gagaagcccttcacgccggggaggaacggagcggagaaggaggggccggaggaggacggc
gaaattcccttctcgaccgccgagcccgaaaacgagctctcgttccgactcaactccccc
cacaaggccggcggccgggccaactcggccgtcaaaaccatgatgaagcccatgtccgcc
ccgggttccctgacgcaccagggcgtgtcggacggcggcagctacctcaagaggaaggcg
gagagggagagcggcaggaccctgaagcagaagctcaatttctctctgccggaccccgac
aggaacttcagcgagctttccaacagcagctggtctgagacgagcccctgggtgatcggc
aacaactaccacctgttccctctgaccccggagatcgagcagaggctcatcctgcagtat
ctcacgcctctgggggagtatcaggagctgctggcggtcttcatgcagatgggagctcga
gagttgctcatgcattacatggacctaaagcagaccaatgacgtgcagctcaccttcgag
gctctaaagtacctggcgtctctgctgctgcacaagaagttcgctgcggagttcgtggct
cacgggggagttcagaagttgctggagatccccaggccgtccatggcggctaccggggtg
tctctgtgcctgtactacctcgcctataaccaggacgccatggaacgggtgtgcatgctg
ccccactccatcctgtcggacgtggtcggttacacgctgtggctgctggagtgctcgcac
gcgtccggctgctgccacgccaccatgttcttctccatctccttctccttccgcgccgtc
ctggagctcttcgacaggcaggacggtctccgacgcctcgtcaacctgatcagcactctg
gagatcctgaaccccgaggaccagggagcgctgctgagcgacgatgagatcttctccagc
aggcagacggccaagcacacctgcatggccctgcgcaggtacttcgaggcccacctggcc
atcaaggtggagcaggtgaagcaatccctgcagcgcacagaggggggcgccccaattcac
tcccaaccgtactataaggcggtcagctacagccgcgagcaggtggtggagatgatggag
tttctgatagagtacggtccactcggactgtactgggaaccagcggaggtctttcacaag
ctgtcatgcgtccagctcctcctgcagctcatttccatcgcctgtgactggaggacctac
tatggcaggagcgacacggtgcgctatgctctcgacatcctgagcatcctcacagttgtg
ccgaagacccagctgctgttgtcggaggccgtcgccgtgctagatgagggcggatccacc
gtttccaccgtcggaatgagtatagtcctggcagtggcagagggagaggtatttgtaaat
gatgccgacatccagaagtcggctctgcaggtcgtcaccaactgcgtctgtgctccggac
aaacgcatgtccagcatcggcaagttcatcgcgggcaccccccgccgccgcctgcctcag
cagagcaaagccagcgagagtgtgctcaccaagatgtggaacgtggtgcagtccaacaac
ggcatcaaggtgctgctgtccctgctgacggtgaagatgcccataaccgacgccgatcag
atccgagccctggcctgcaaggctctggtgggtctgtcccgctccacctccgtcaggcag
atcatcagcaagctgcctctgttcagcagcggacacatccagcagctgatgaaggagccc
gtgctccaggacaagcgcagcgagcacgtcaagttctgcaagttcgcggccgagctgatc
gagaggatctccgggaagccgctgctgatcggcacggacgtgtctctggcgtggctgcag
agggccagcgtggtcgccaagtcccggatctccttccccgagaaggagctgctgctgctc
atccggaaccacctggtggccaaaggccttcacgacaccgccaccgccctcacgaaggag
gcggatctcccgatggcgtgtctgtcgctagcgacgcacgccgcctccggtttccccccc
gtcgccccgcccccgcccgcctcccccgtcgccacgttgccccgcaccccgcggctggca
aacggcgttgtgtcgagactcgcgagccacgcccctcattccaccagcccgggatccagc
aatctgcaaacgcgcccctccacgtcgcagcccgccgcggcttctgccgccgcagccgca
gctttcccctccacgtccacctcgccgtgcagcaacggctcgccgctcatcgggcgcatc
gttttctcccgcgaacggctcgccgggtacgccacggcgagctgcaagaaaccccgggtg
ctgaggcagaagtccgaccacggcgccttcagccagagtccggccatgaagaagcagttc
gaccggcacctgccgtccccgccggcgttggacagcatcatcacggagtacctgagggag
cagcacgcgcgctgtaaaaaccccgtggcgacgtgcccgccgttctccctcttcaccccc
catcagtgccccgagcccaaacagagacgccaagcacccattaacttcccatcccgccac
actcggagggttatatatcctaaatacgggggagtggacgggggctgcttcgacagacat
ctcatcttcagcaggttccgtcccatctccgtgttcagggaggctgaggaggacgagagc
ggcttcatgtgttgcgccttctcggcccgcgagcggttcctgatgctcgggacgtgcacc
ggccacctcaagctgtacaacgtgttcacgggccaggaggaggccagctacagctgccac
agctcggccatcactcacctggagccctcgcgggatggctctctgctcctcacgtcagcc
tcttggagcttctcgctgtccgcgctgtggggcatgaaatcagtcttcatcatgaagcat
tcctttctgggcgaccattacgtggagttcagtaagctctcgcaagatcgcgtcattggg
accaaggagcacatagcgcggatttatgacatccagacgggtcaggtgactctgacccta
aacaacccggacctggccaacaactacaagaggaactgtgccaccttcaacccgacggac
gacctggtgctgaacgacggcgtgctgtgggacgtgcgcacggctcaggccatccacaag
ttcgacaagttcaacatgaacatcagcggcgtgttccatcccaacggcctggaggtcatc
gtgaacacggaaatctgggatctgcggaccttccacctcctccacatggtccccgctctg
gatcagtgccggatagtcttcaacaacaacggcaccgtcatctacggagcgatgcttcag
gccgacgacgaagacgacatgatggagctgcagatgaaaagtccgctcggttcgtcgttc
aggaccttcaacgccacgggctacaaaccaatcgccactatcgatgtcaagaggaacata
tttgacctttgcactgataccaaagactgctacctcgctgtgattgagaaccaagactct
gtgaacactgacacggtgtgcaggctgtacgaagtcggccggcagagacttgcggaggaa
gaggaggaggacgaggaggatcaggaggacgacgatcaggaggaagacgacgacgacgac
gaggattccggcgacacggatcccctcatcgccgagctggagaacgacgacgacgacgac
gaagaggaggaggaggacgacgacgggaacgacgaattctctccctccgacgaggaggtg
tcgcgcctcctcgaaggcggcggcgacgacgaggacgactccgataacggcgatcaggcg
ctcctctacgacagctcggacaactccgacctcgaagatgacatcatcttatccctgaac
cagtga
DBGET
integrated database retrieval system
