Cyclopterus lumpus (lumpfish): 117733415
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Entry
117733415 CDS
T09199
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117733415 (rtel1)
Enzymes [BR:
clum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117733415 (rtel1)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117733415 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
117733415
NCBI-ProteinID:
XP_034392937
Ensembl:
ENSCLMG00005019335
LinkDB
All DBs
Position
7:complement(155808..177495)
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AA seq
1225 aa
AA seq
DB search
MPSLTLSGVTVNFPFPPYDCQKDYMGKVMECLQKKANGVLESPTGTGKTLCLLCATLAWR
EHFKDTISARKIAEKLGGGEMFPNTPIASWGTAATDGATPTYYTDVPKIIYASRTHSQLA
QVISELKNTSYSPKVCVLGSREQLCINQEVMRQESHHAKVHMCRGKVSTRSCVFYNNVEE
KSTDRDLVKSILDVEDLVKFGNKQRVCPYYLSRSLKQQADVIFMPYNYLLDPKSRKAHNI
ELNGAVVIFDEAHNVEKTCEESTSFDLTPYDVASAISAVDRLLVEQAKEDTVSEDFNVEG
LSSGLKVNLETIATVKQILLDLEAAVDAYDVPSEKGITKPGIFIYELLERVHLTYNSKTA
VSEALEQIIGHLTGQSGIFLNTTGLQKLADIIQLVFCGEPSEKDRLQQMQSNTAHFKVHI
HRDKSYQKKPQSTDVWASSSSKKQGNILSYWCFSPGFSMQDLVAQGVRCIILTSGTLAPL
SSFTCEMRIPFSVSLENSHVIERDQIFVGVIERGPDGVHLSSAFDRRFLPENMASLGNTV
ANLSRVVPDGLLVFFPSFPLMEKTLDFWRCVCVCVCVCVCVCVCVCAYQTNGHAARIDSV
KPIFVEPKGKGTFNEVIDGYYNKVNDPTSKGGTFFAVCRGKASEGLDFADTFGRGVIITG
LPFPPKMDPRVILKMQFLDEMSRKKAPGVKYLSGQEWYKQQAFRAVNQAIGRVIRHKDDY
GAILLCDQRFKGSGARAQLPSWVRPYVRLYESFGNVIRDVSQFFRVAQKMRPVVGKKAAA
QCSGTGCSPDTSSSGFPSCSSSQSSHTQKAKKLDAHLPSLKRRRLDEPSGTNGMARICIE
YESEMQESQKRPANLLDALERGDQCEGEDENVVVGEEKADRLSTLSLQCDKRMDDEMRGG
KRKIKLVQEQKSCRSEDVSGEGSPSSKAKSFLVQMKSLSQINFNRIMQALQAYKKADHLD
LLLTEAAVLTEDANTHGLLRGLYQFVRPHHKKRFDEKCQQLTGQGCGYEPSHSLSVDDKK
ALVLQSAPASQPAVGLTSSTCSQLNTQQLNKGGPHLNQQGLREPQTAPASQPAVGLTSST
CSQLNTQQLNKGGPHLNQQGLREPQTGSASKTDIHSAFLADVKKAIGAEKSARLFQAIKS
FKKTDGYDALVTTVVSLFTERDEDFKLLIRFGLFIPTRHKKQYKEMLDALIGPSVSAAGV
PAASEEHQRPGEEHQRPDEEQLDVI
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactcaccctgagcggagtcacggtgaacttcccgtttcctccatatgactgc
cagaaggactacatgggcaaagtgatggagtgtctccagaagaaggccaatggggttctg
gagagtcccacaggtactggtaagaccctgtgcctgctgtgtgccaccctggcctggagg
gagcacttcaaggacaccatctctgcccgcaagatagcagagaagttaggcggaggggag
atgttccccaacacacccattgcatcctgggggacggctgctacagacggggccacacca
acctactacacggatgttcccaagatcatatacgcttccaggactcattctcagctggca
caggtcatcagtgagctgaagaacacctcgtacagcccaaaggtgtgtgtgctgggatca
agagagcagctgtgtatcaaccaggaagtgatgcgccaggagagccaccacgccaaggtc
cacatgtgcagaggaaaggtttccaccaggtcgtgtgtcttctacaataacgtggaagag
aagagcactgacagagatctggtgaagtccatcctggacgtcgaggacttggtcaaattc
ggcaacaaacagagggtctgtccttactacctgtcccggtccctgaagcagcaagcagac
gtcatctttatgccttacaactacctgctggatccaaagagccgcaaagctcacaatatc
gagctaaacggagccgtggtcatctttgatgaagctcacaatgtggagaagacgtgtgaa
gaatccacatcatttgacctcactccctatgatgtcgcctcagccatcagtgctgtggac
cggctgctggtggagcaggctaaagaagacaccgtctcagaagacttcaatgttgagggc
ctcagctcaggtttaaaagtaaatctagagaccatcgctacggtcaagcagattctgctg
gatctggaggctgctgttgacgcctatgatgttccaagtgaaaagggcatcacgaaacct
ggaatcttcatctatgagctgttggagagagtccacctgacctacaacagcaagacggct
gtctctgaagctctggagcagatcattggacacttaacaggacagtcaggaatattcctg
aacactactggactgcagaagctggctgacatcatacagctggtgttctgtggtgaacct
tcagagaaggatcgactacagcagatgcagtccaacacggctcattttaaggttcatatc
catcgagacaaaagctatcaaaagaaaccacaaagcactgatgtgtgggcttcctcttca
tcaaagaaacaaggtaacatcctgagttactggtgcttctctcctggcttcagcatgcag
gatctggtggctcaaggtgttcgctgcatcattctgaccagtgggaccctcgctcccctc
tcctcattcacctgtgagatgaggatcccgttctcagtgagtctggagaacagccatgtg
atcgagcgggaccagatctttgttggcgtcattgagcgaggcccagatggcgtgcacttg
agctcagcgtttgatagaaggtttcttcctgaaaacatggcgtctttaggcaacactgtt
gccaacctgagccgtgtggttcctgatggtcttttagtgtttttcccttccttccctttg
atggagaaaacccttgacttctggagatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgcgtatcagactaacggacatgcagctcgcattgacagcgtg
aagcccatctttgttgagcctaaaggaaagggcacctttaatgaggttattgacggatat
tacaacaaagtcaacgatccaacatccaagggggggacattctttgctgtgtgtcgaggc
aaggctagtgagggtctggactttgccgacacctttggtcggggtgtcatcatcaccggc
ctcccgttccctcctaagatggacccccgagtcatcctgaagatgcagtttttggatgag
atgagtcggaagaaagctcctggggtaaagtacctgtctggacaggagtggtacaaacag
caggctttcagagctgtgaaccaggccatcggtagagtcattcgccacaaggacgactat
ggagccatcttgctgtgtgatcaaaggtttaagggctctggtgcccgagctcagcttcca
tcctgggtccggccttatgtgcgtctgtatgaaagctttgggaatgtgatccgggacgtc
tctcagttcttcagggtggcacagaagatgaggcccgtggtagggaagaaggctgcagca
cagtgctctgggacagggtgctctccagacacttcgtcctctggcttcccttcctgctca
tcctcgcagagctcccacacccagaaggccaaaaagctggacgcccacctccccagcctg
aagaggaggaggctcgatgaaccctctggaaccaatgggatggccaggatctgcattgaa
tatgagagtgagatgcaggagagtcagaagagaccagccaacctgctggatgctctggag
cgaggggaccagtgcgagggagaggacgaaaatgttgtcgtgggagaagagaaggccgac
cgcttgtccacgctgtctcttcagtgtgacaagaggatggacgatgaaatgcggggagga
aaacgtaaaatcaaattggtccaagaacagaagtcatgcaggtcggaggacgtctctggg
gaaggttcacccagcagcaaggccaagagcttcctggtccagatgaagtccctgagccag
attaactttaaccgcatcatgcaggctctgcaggcctacaagaaggccgaccacctggac
ctcctgctcactgaggcagctgtcctcaccgaggacgccaacacccacggtctgctccgg
ggcctctaccagtttgttcgcccacatcacaagaagaggtttgatgagaagtgccagcag
ctgaccggccagggctgtggatacgaacccagtcactcgctgtctgtggacgataagaaa
gccctggtgctgcagagcgctccagccagtcagcctgctgtgggtctgacctcctctacc
tgcagtcagctgaatacacagcagctgaacaaaggaggaccccacctaaaccagcaggga
ctaagagaacctcagaccgctccagccagtcagcctgctgtgggtctgacctcctctacc
tgcagtcagctgaatacacagcagctgaacaaaggaggaccccacctaaaccagcaggga
ctaagagaacctcagaccggttctgcttcaaagaccgacatccactccgcctttctggcc
gatgtgaagaaagccatcggcgcagagaaatccgctcgcctctttcaggccattaagagc
ttcaagaagacagacggctacgacgccctggtgaccacggtggtgagcttattcacggag
agagacgaggacttcaagcttctaatcagatttggtctgttcatccccactcgccataag
aagcagtacaaagagatgctggatgctttgataggtccgtccgtctctgctgctggagtt
cctgctgcaagtgaagaacatcaaagaccaggtgaagaacatcaaagaccagatgaagaa
caactcgatgtaatctag
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