Cyclopterus lumpus (lumpfish): 117733435
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Entry
117733435 CDS
T09199
Name
(RefSeq) fascin-like
KO
K23551
fascin 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117733435
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117733435
Membrane trafficking [BR:
clum04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117733435
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117733435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fascin
FRG1
DUF569
RicinB_lectin_2
FGF
Beta-tre_PLH30
WD40
Motif
Other DBs
NCBI-GeneID:
117733435
NCBI-ProteinID:
XP_034392970
Ensembl:
ENSCLMG00005000298
LinkDB
All DBs
Position
1:21217416..21222625
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AA seq
497 aa
AA seq
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MSANGADGDLLQIPLGLINSEGKYLTAETFGFKINASASSLKKKQTWTLEQTGEDGSAVF
LRSHLGRYLATDKDGNVTADSETRGACRDCRFVVTAHEDGRWSLQSEPHGRYLSGSEDRI
TCFAQAATPAERWSVHLAVHPQVNLYSLARKRFAHLSARGERHEVSIDRDVPWGVDSLVT
LVYRDQRYHLETSDNRFLRNDGSLSTNTDKDTGYVLEFRSGKVAFRDCNGRYLAPGGPTG
TMKSGKGTRAGKDELFGLERSHAQVVLTAGNERNVSTRQGMDLSANQDEEGDQEVFQLEM
SREDRKCAFRTASGKYWTLTASGGLQCTASNKSANSFFELEWRDGRVCVRAANNKYVIAK
RNGQLAATVDSAGEAEQFLMKLINRPIIVLRGEHGFIGARKAGMATLDSNRASYDVFQLE
FHNGAYSLKDSQGKYWCVGDDSAVGCSSATPVQFLFEFCDLNKMAIRALGGKYLKGDHAG
GLKASVDSLDSATRWEY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaacggcgccgacggggacctgctgcagatccctctggggctcatcaacagc
gagggcaagtatctgacggcggagaccttcggctttaaaatcaacgcgtcggccagcagc
ctgaagaagaagcagacctggaccctggagcagaccggggaggacggcagcgccgtgttc
ctgcgctcccacctgggccgctacctcgccacggacaaagacggcaacgtcaccgcggac
agcgagacgcgcggcgcttgccgcgactgccgcttcgtggtcaccgcgcacgaggacggg
cggtggtctctgcagtccgagccccacggccgctacctcagcggcagcgaggaccgcatc
acctgcttcgcgcaggctgccacgccggcggagcggtggagcgtgcacctggccgtgcac
ccgcaggtcaacctgtacagcctggcgcgcaagcgcttcgcccacctgagcgcgcgcggg
gagcggcacgaggtgtcgatagaccgcgatgtcccctggggggtggactctctcgtgacg
ctggtctaccgggaccagcgctaccacctcgagacttctgacaaccgcttcctccgcaac
gacggcagcctgtccacgaacacggacaaggacaccggctacgtgctggagttccgctcc
gggaaagtggctttccgcgactgcaacggccgctacctggcgcccgggggcccgaccggc
accatgaagtctgggaaaggcacccgggccgggaaggacgaactgtttggcctggagcgg
agccacgcgcaggtcgtgctgactgcaggcaacgagaggaacgtctccacgaggcaaggc
atggacctgtcggccaatcaggacgaggaaggggaccaggaagtcttccagctggaaatg
agccgtgaggacaggaagtgtgccttcagaaccgcttctgggaaatactggactctgaca
gcgagtgggggactgcagtgcaccgcctccaacaagtcggctaacagcttctttgaactg
gagtggcgtgacggtcgtgtgtgtgtgcgtgcagccaacaacaaatatgtgatcgctaag
aggaacggacagctagccgctactgttgacagcgcaggggaggccgaacagttcctgatg
aagctgatcaaccgtccaatcatcgtgcttcgtggggagcacggcttcatcggcgctcgt
aaagcgggaatggcgactctggactccaaccgagcgtcctacgatgttttccagctggag
ttccacaacggagcctactccctgaaagactcccaggggaagtactggtgtgtcggagac
gactcggcggtgggctgcagcagcgccacgcctgtccagttcctgtttgagttctgtgac
ctcaacaagatggccatccgtgctctgggggggaagtacctcaaaggggaccatgctgga
gggctgaaggccagcgtcgactcgctggacagcgccacccgctgggaatactga
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integrated database retrieval system