KEGG   Cyclopterus lumpus (lumpfish): 117733462
Entry
117733462         CDS       T09199                                 
Name
(RefSeq) rho-related GTP-binding protein RhoA-C-like
  KO
K04513  Ras homolog gene family, member A
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04081  Hormone signaling
clum04144  Endocytosis
clum04150  mTOR signaling pathway
clum04270  Vascular smooth muscle contraction
clum04310  Wnt signaling pathway
clum04350  TGF-beta signaling pathway
clum04510  Focal adhesion
clum04520  Adherens junction
clum04530  Tight junction
clum04621  NOD-like receptor signaling pathway
clum04625  C-type lectin receptor signaling pathway
clum04810  Regulation of actin cytoskeleton
clum05100  Bacterial invasion of epithelial cells
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117733462
   04350 TGF-beta signaling pathway
    117733462
   04150 mTOR signaling pathway
    117733462
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    117733462
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117733462
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117733462
   04520 Adherens junction
    117733462
   04530 Tight junction
    117733462
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117733462
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117733462
   04625 C-type lectin receptor signaling pathway
    117733462
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    117733462
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117733462
   05100 Bacterial invasion of epithelial cells
    117733462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117733462
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117733462
   04031 GTP-binding proteins [BR:clum04031]
    117733462
Membrane trafficking [BR:clum04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    117733462
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117733462
  Exosomal proteins of other body fluids (saliva and urine)
   117733462
  Exosomal proteins of colorectal cancer cells
   117733462
  Exosomal proteins of bladder cancer cells
   117733462
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    117733462
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB VASP_tetra
Other DBs
NCBI-GeneID: 117733462
NCBI-ProteinID: XP_034393021
Ensembl: ENSCLMG00005007382
LinkDB
Position
7:14442324..14445720
AA seq 193 aa
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKYEDGKEMANRISAYGYQECSAKSKDGVREVFEMATRAALQ
AKKRGKKSTCLLL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggcagccatcaggaagaagttggtgattgttggggatggtgcatgtgggaagacctgt
ctgctcatcgtcttcagtaaggaccagttcccagaggtctacgtccccactgtgtttgag
aactatgtggcagacattgaggtggatgggaaacaggtagagctagcactttgggataca
gcaggtcaggaagactatgaccgactgaggcctctctcctaccccgacactgatgttatt
ctcatgtgcttctctgtagacagccctgacagtttagagaatattccagaaaagtggacc
cctgaagtgaaacacttctgtccaaatgttcccattatcctggttggcaataaaaaagat
ctgcgcaatgatgagcacaccagacgagagcttgccaaaatgaaacaggagccagttaaa
tacgaagatggcaaagagatggcgaaccgcatcagtgcctacggctaccaagagtgttct
gccaaatccaaagatggtgtaagggaagtctttgagatggcaactagggcagcactgcag
gccaagaaacgtggcaagaagtccacctgccttctgttgtag

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