Cyclopterus lumpus (lumpfish): 117733468
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Entry
117733468 CDS
T09199
Name
(RefSeq) poly(rC)-binding protein 4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117733468
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117733468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
117733468
NCBI-ProteinID:
XP_034393035
Ensembl:
ENSCLMG00005009950
LinkDB
All DBs
Position
7:complement(22876923..22912038)
Genome browser
AA seq
463 aa
AA seq
DB search
MRLPARHAHITMNCEQDFADGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARV
NISEGSCPERIITITGSTDCVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPAS
QCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQESVIQCVRLICTVIL
ESPPKGATIPYRPSPSPAALLIAGNQVYEASDFAPHPLYSVTQAGLDLQQAYTLQNQYGI
PHSEMAKLHQLSMQQQQQQQQGLGPMAQPASAIIPGMDSNSQTSQELLIPNDLIGSIIGR
QGTKINEIRQVSGAQIKIGSQLDGTSDRHVTIVGTPVSINLAQYLITSCLETAKSTAQAV
TMASPVDLNMAFAQPNSPAVSPGPTMATMGALTPAHMLGNPYGAMPLSGLLGVKSVPFLT
LSSQGPNVAVTAAPSHSALAAYTAKISSANCIKKPERQKFAPY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccccgcgcgccacgcccacatcaccatgaactgtgagcaggactttgcagac
gggggtctgggagtgaccctcacactacggctgctcatgcacgggaaggaggtcggcagc
atcataggaaagaaaggagagacggtgaagcgaatacgagaagagagcagcgctcgggtc
aacatctcagagggctcctgtccagagaggatcatcaccatcaccggctccacagactgc
gtcttcagagctttcaccatgatcacgtacaaactggaggaggacctgactgcactggtg
gccaacggcaccatcagctccaagccgccggtcaccctgcggctggtaatccccgccagc
cagtgtggctctctcatcgggaagggaggggctaagataaaggagatccgagagagcacc
ggagcgcagatacaggtggcgggggatttgctgcccaactctaccgagcgaggggtgacg
atatctgggaatcaggagtccgtaatccagtgcgtcaggctcatctgcacagtaatcctg
gagtctcccccgaaaggagcgaccatcccctaccgaccgagcccctcgccggctgccctc
ctcatcgcagggaaccaggtgtacgaggcgtccgacttcgcaccccaccctctgtactcc
gtcacccaggccggcctggacctccagcaggcctacactttgcaaaaccaatacggcatt
ccacactcagagatggccaagctccatcagctgtccatgcagcagcagcagcagcagcag
cagggcctcggtccgatggcccagccggcttccgccatcatacccgggatggactccaat
tctcagacctctcaggagctgctcatccccaatgatctgatcggctccatcatcggccgc
cagggaaccaagatcaacgagatccggcaggtgtccggagcccagatcaagatcggcagc
cagctggacggcacgagcgaccgccacgtcaccatcgtgggaacgccggtcagcatcaac
ctggcccagtacctcattacctcctgtttagagacggccaaatccacggcccaggccgtc
accatggcgtctccggtggacctcaacatggccttcgcccagccgaactcccccgccgtc
tcccccggacccaccatggccaccatgggcgcgctgaccccggcccacatgctgggcaac
ccgtacggcgccatgcccctctccggcctgctgggggtgaagtccgtcccctttctgact
ctgtccagccagggccccaacgtggccgtcaccgcggcgccctcccacagcgccctggcc
gcctacaccgccaaaatctcctcggccaactgtatcaaaaagccggagagacagaagttc
gctccgtactga
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