Cyclopterus lumpus (lumpfish): 117733475
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Entry
117733475 CDS
T09199
Name
(RefSeq) PDZ domain-containing protein 4-like
KO
K24056
PDZ domain-containing protein 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117733475
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117733475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117733475
NCBI-ProteinID:
XP_034393049
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All DBs
Position
7:complement(19055650..19069095)
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AA seq
937 aa
AA seq
DB search
MGCNMCVVQKPEEQYRVMFQKSHINNMLCSFEADGRFKVNGKELSRLSGDPTLDMRDPVL
SNILRRGVRKRAGLAGPPGGLVPVTMGMADCVDSCTQTDISFQHMLTLGKSSQHPCGAPP
PPDPPPSPPLPPLLEPYLLNELFIEPVYYDPTDYFDINQHEVDRQDELEYEEVELYKSRQ
QDKLGLTVCYRTDDEEDLGIYVGEVNPNSIAAIDGRIRKGDRILQVHINGVDIQDREEAV
AILTREDSTNVSLLLARPEIENDNQLDQDELDLETLDNAVHLAGSHRVRNGTSVLGAGPG
GVAGGGVLGGLGRSMNRDSPDLLHTVLSNSQELDSGVGRTDESTRYEESSEHDLLGDDHT
SASNTNATNTPGSMRKFLSGRGGDTPPLLHSQDFQFSTDSLLGLDCVNGGGLEQVERAYA
ADSVRMMMPGLTEEECERYKELLEIKCYYEKISNALMPLGGQGLAQEDGVSLDVNRNESL
TQHEMALLEEELRHLEFKCRNILRAQKMQQLRERCLKAWPLEDKNGASAGAGVGAGRFDI
SGALVSEESRHHELSDINELPERERSDKDSTSAYNTGGESCRSTPLVNEQYPSPSTQSLE
GGEPLLLAGAHLPSSTRQRERGTRAERGDVTQANLNQPYSPHSHRRRAEAKTYSPGAKVR
SLSRDRGTRRGSDGEVRRAPKANGAAERSGGYSADNSPYLSRRQADTMPPQHYLSCMQLR
SPSTSERLGGLRDAPGEGGMESWGDASPMSLGSTCKDVAQALAAVPLSPPMPPASPRMEW
KVKIRSDGSRYVAKRPVRDRLLKARAMKIREERSGMTTDDDAVSEMKMGRYWSKEERKQQ
LLKAREQRRRREFMMQSRLDCLREREREQGGSGGGQQGTPQQQEPTSILELCHRRSVKKR
SRRILDNWITIQELLAHGSRSADGKKVYNPLLSVTTV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaacatgtgcgtggttcaaaagcctgaggaacaatacagggtcatgttccag
aagagtcacataaacaacatgttgtgctcttttgaggccgacggtcgatttaaggtgaat
ggaaaggagctgtcccgcctttctggggatcccaccctggacatgcgggaccctgtgctg
tccaacatcctgaggcggggggtccgcaaacgtgcaggtttagcaggaccccctggcggc
ttagtgccagtgaccatgggtatggccgactgtgtagacagctgcacccaaacagacatc
agcttccagcatatgttgactctgggcaagagcagccagcatccctgtggcgctccgccc
ccacccgaccctccgccctcccctccgctaccgccgctactggagccatacctactcaat
gaactcttcatagagcccgtctactacgaccccactgactacttcgatatcaatcagcat
gaagtggacagacaggatgaactggaatatgaggaggtggagctgtacaagtctcgtcaa
caggataaactcggcctgacggtgtgttacagaaccgatgatgaggaggacctgggaata
tatgtcggagaggtgaacccaaacagcattgctgcaatagatggccgcatccgcaaagga
gacagaatcctacaggtacacataaatggagtggacatccaggaccgagaggaggcagta
gctattctcaccagagaggacagcactaatgtctcgctgctccttgcacgacccgagata
gagaatgacaaccagctggaccaagacgagttggacctggagacactggacaacgcggtt
catctagccggcagtcacagagtgaggaacggcacctccgtcctgggtgccggtccaggt
ggtgttgcaggtgggggggtgctgggaggcctcggccgctcaatgaacagggactcgccc
gatttgctccacacggtgctgagcaacagccaggagctggacagcggggtgggccgcacc
gatgagagcacgcgctacgaggagtcttcagaacacgacctcctgggggacgaccacacg
agtgcctccaacaccaacgccaccaatacgcccggcagcatgcgcaagtttttgtcaggc
cgaggaggggacaccccgcccttgctgcactcccaggacttccagttcagcacggactcc
ctcttagggctggactgtgtaaatggaggagggctggaacaggtggagcgggcttacgct
gccgattctgtgagaatgatgatgcccgggctgaccgaggaggagtgcgagaggtacaaa
gagctcctggaaatcaagtgttactatgagaagatcagtaatgctctgatgccactgggg
ggtcaggggctggcccaagaggacggtgtctcgctggatgtgaacaggaatgagagcctg
acgcagcacgaaatggccctcctggaggaggaactgcggcacttggagttcaagtgtcgc
aacatcctgagggcgcagaagatgcagcagctgagggagcgttgtctgaaggcctggcct
ctcgaggacaagaacggagccagtgcaggggctggagtaggagctggacgctttgacatt
agtggtgcgttggtcagcgaggagtcgcgtcaccacgagctgtcagacatcaatgagctc
ccagagagggagcgctcggataaggacagcaccagtgcctacaacactggaggggaaagt
tgcaggagcactcctctggtcaatgaacagtacccttcgccctctacacagagcctggag
ggaggagagcctcttctcctagcaggtgcgcatcttccatcctctactcggcagagagag
agaggaaccagggcagagagaggcgacgtgacacaagcgaacctcaaccagccctactct
ccccactctcacaggagacgagccgaggccaagacgtacagccctggagctaaggtcagg
tccctgtcccgggacagaggcaccaggcggggctcagatggagaggtgagacgcgccccc
aaagccaatggggccgctgagaggtctggtggctacagtgcagacaacagcccttacctg
tctcgccgtcaggcggacacaatgccacctcagcactacctgagctgcatgcagctgagg
tccccctccacctcggagcggctcggtggactccgagacgctcccggagagggcggcatg
gagagttggggcgatgccagcccaatgagcttgggcagcacgtgtaaagatgtcgctcag
gccctcgcggccgtccccttgtcccctccgatgccgcctgcgtcacctcgcatggagtgg
aaggtgaagatccgcagcgacggctctcgctacgtggccaagcggcctgtgagggatcgc
ctcctgaaggcgcgcgccatgaagatcagagaggagcgcagtggcatgacgacggatgac
gacgccgtgagcgagatgaagatgggccgttactggagcaaagaggagcgcaagcagcag
ctgctgaaggcccgagagcagcggcggcgcagggagttcatgatgcagagccgtctcgac
tgtttgagggagcgcgagagggagcagggaggaagtggtggaggacagcaggggacgcct
cagcagcaggagcccacctccatcctggagctgtgtcaccgcaggagcgtgaagaagcgc
agtcgcagaatcctggacaactggatcacgatacaggagcttctggcccatgggtccagg
tctgcagatgggaagaaagtctacaacccactgctgtccgtcaccacagtctga
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