Cyclopterus lumpus (lumpfish): 117733546
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Entry
117733546 CDS
T09199
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117733546 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117733546 (l1cama)
04090 CD molecules [BR:
clum04090
]
117733546 (l1cama)
04091 Lectins [BR:
clum04091
]
117733546 (l1cama)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
L1 family
117733546 (l1cama)
CD molecules [BR:
clum04090
]
Proteins
117733546 (l1cama)
Lectins [BR:
clum04091
]
I-type lectins (Siglecs)
117733546 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
V-set
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_4
C2-set_3
V-set_CD47
Pur_ac_phosph_N
Ig_VEGFR-1-like_5th
Ig_6
DUF4998
Motif
Other DBs
NCBI-GeneID:
117733546
NCBI-ProteinID:
XP_034393182
Ensembl:
ENSCLMG00005005065
LinkDB
All DBs
Position
7:12711405..12750026
Genome browser
AA seq
1278 aa
AA seq
DB search
MPHTQRQQVGSRGRCSPPLLPFLLLLSLAATPSQAAIHIPSNFKRPPMIITQPESVTVFS
VEDLVMSCEATGNPQPIFRWTKDGEEFDPGSDPELKVSERSGSFAFYTLSNTMDSLKQYQ
AKYICYASNVLGTAVSNEARLNTDVPPTQQKEKKVHVKSEEGNSIVLKCNPPQSSMEPII
HWMDWRLHHIQLSERVVVGKDGNLYFAHLTTEDSRNDYTCNVQYLATRTILAKEPITLTV
NPSNSLLQNRRPHMLRPTGSHSTYHSLRGQTVELECIVQGLPTPKVSWLRRDAEMSESRI
IKDMFNRRLRFNNISESDAGEYQCMAENSQGKATHTYTVTVEAAPHWIKEPPSQLYAPGE
TVKLHCQADGIPTPTISWTINGIALSETDKDTRRSLTTGGFLILKDVNLGDTAVYQCQAS
NKHGTILTNTNVYVIELPPQILTEDGMTYTFTEGQKALLECVTFGSPKPEVTWESGSASS
LLEDPRVKPFTNGVLEISNVTHDDEGFYTCSVQNTNLSVNAELEVLNRTVILSPPQALKV
QRGNTTIFTCLSLVDPKLGSPLIQWRKNNQKISESHTDGKYTIDGPDLKITNVEADDEGV
YTCQVITKHDMAEASGTLTLWDRPDPPVLLQITDPKHRAVTLSWTPGDDHNSAVLEFVVE
FEDQGLKERGWEELKRVTGNKQRASLPLWPYMSYRFRVIAINYVGKSGPSKPSEIHNTPA
EAPDNNPEDVRSESKDPETLFIRWEEMDKRNFNGPDFKYRVLWRRVVGSGPSWHTNYTTT
QPFTVNDSGNFSAFEIKVQAVNEKGEGPEPDPVIGYSGEDVPLEAPMNVGVVLMNSTTIK
VNWAAVNKETVRGNLLGYKVYLTRIGSRSHHRGRRSREPENTLVVATVANEEEKVISDLR
PYSHYALVVTVFNSKGEGPPSETLSFKTHEGVPGPPMSMMLDSPSETEMTLHWTPPAQPN
GVLIGYLLQYQQIVESDDSPMQVQTIEDPIATHLTLRALDPHSQYRFFLRGRTTAGDGEL
IMREGATTLDGAPPAKFNFTVGENSVNLSWVAKKRHRNVSFQIYYLNTNAGINKWKKKEV
NSSQSFYQLQGLTPRSHYRLRFTYSNSTLFEENIETLGTGVTEVQPSFATQGWFIGVVSA
IVLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLEEKRTA
SQPSLGEESKLCSEDNLDFNGSSAITTELNMDESLVSQFSRPSEGPEALHGLPDNSPLNP
TAVSPATNGMPNSVTILD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcgacagcaggttggcagtagggggcggtgctcccctcccctcctc
ccattcctcctcctcctctccctagctgccacgcccagccaagcagccatacacataccc
tccaacttcaagagacctccaatgatcataacacagccggagtctgtcaccgtctttagt
gttgaagacctcgtcatgagctgtgaagccactggcaaccctcaacccattttccgatgg
acaaaggatggagaggagtttgacccaggcagtgacccagagctgaaggtttctgagcgc
tctggctcatttgcattctacacactcagtaacaccatggacagcttgaagcagtaccaa
gccaaatacatctgctatgcatccaacgtgcttgggacagccgtctctaatgaggcccgc
ctcaacactgatgttcccccgacccagcagaaagaaaagaaggtgcatgtgaagtctgaa
gagggaaacagtatcgttctgaagtgtaaccccccacagagctccatggagcctattatt
cactggatggactggaggctacaccatatccagctaagtgaacgggtggtcgtggggaag
gatggcaacctatactttgcccatttgacaaccgaggacagcaggaacgactacacctgc
aatgtccagtacctggcgacacgcaccattctggcaaaggaacccatcacgctgactgta
aacccttccaactctctacttcagaacaggaggccccacatgttaagacctactggaagc
cacagcacttaccattccctcaggggccagaccgtggagcttgagtgcatcgtccaaggc
cttccaactcccaaagtttcgtggctgaggagggacgccgagatgtctgaatctcggatc
attaaagatatgttcaatcgccgcctgcgcttcaataatatctcagagagtgacgcgggc
gagtaccagtgtatggctgagaactcccaagggaaggccacacacacttacactgtgact
gtggaagcggctccccactggatcaaggagccacctagtcagctatatgccccaggtgag
actgtcaagctacactgccaggcagacggcatccccactcctactatcagttggaccatc
aacgggatcgccctctcagaaaccgacaaggacaccagacgatctctgacaaccggcgga
tttctaatactaaaggatgtcaacctgggggacactgccgtctatcagtgccaggcctcc
aacaagcatggaaccatcctcaccaacaccaacgtctatgtcattgagctgcctccccag
atcctgactgaggatggaatgacatacacatttacagagggccagaaagctttactggag
tgtgtaacctttggctctcctaaacctgaagtcacatgggagagcggtagcgcctcctcc
cttctggaagatcccagagtgaagccattcaccaacggagtgcttgagatctctaatgtc
acccatgacgacgagggcttctacacgtgctctgtgcagaacaccaacttgtctgtcaat
gccgagctggaagtgctcaacaggacagtgatcctgtcgcctccacaggctctgaaggtg
cagcgtggaaacacaacaatcttcacttgtctgtctcttgttgacccaaaacttggctct
ccactcattcagtggagaaagaacaatcaaaagatctctgagtcccacactgacggaaaa
tacacaattgatggaccagacctgaaaataactaacgtggaagcagatgatgagggtgtt
tacacctgtcaggtcatcactaagcacgacatggctgaagccagtggcaccctcacttta
tgggatcgcccagaccctcctgtcctgctccagatcactgatcctaagcatcgagcagtc
accctcagctggactcctggagacgaccacaacagcgccgtgctagagtttgtagttgag
tttgaggaccaaggtttgaaagagaggggttgggaagagctgaagagagtaacaggaaac
aagcagcgtgctagcctccctctgtggccctacatgtcttaccgtttccgggtcattgcc
atcaattatgtgggaaagagcggccccagcaagccatctgaaatccacaatacacccgct
gaagctccagacaataaccctgaagatgttaggagtgagtccaaagacccagagactcta
ttcatccgctgggaggaaatggacaaacgtaacttcaatggacctgacttcaagtatcgg
gtcctatggaggcgagtggtgggcagcggacccagctggcacaccaactacacaacaaca
cagccattcacggtcaatgacagtggcaacttttctgccttcgagatcaaagttcaggct
gtcaatgagaagggggagggacctgagccagatcccgtcatcggttactcaggagaagat
gttccattggaggctccaatgaatgtgggtgttgttttaatgaacagcactaccatcaaa
gtgaactgggcagcagtgaacaaagagacggtcagaggaaacctgctgggatacaaggtc
tacttgaccagaattggctccaggagccaccacagaggccggaggtccagggagccagag
aacactttggtggtggcgactgtggccaacgaggaagagaaggtgatcagtgatctcaga
ccatactcccactacgcgctggtcgtcactgtattcaacagcaagggagagggacccccc
tctgagacgctgtccttcaagactcatgagggagttcctggtcctcccatgtccatgatg
ctggacagcccatcagagacagaaatgaccctccactggacgccacctgctcagcccaat
ggagtcctcattggatatctactacagtaccaacagattgtggagagcgatgacagcccc
atgcaggtacagactatagaggaccccatagccacccacctcaccctgagggccctggac
ccccacagccagtaccgcttcttcttgagggggcgcaccactgcaggggacggggagctc
atcatgagggagggggccaccacactggatggagcacctcctgccaagttcaacttcact
gttggagaaaactctgttaacctcagctgggtggccaagaagaggcacaggaacgttagc
ttccagatatactacctcaatacaaatgcaggtatcaataaatggaagaaaaaagaggtg
aattcctcccagtctttctaccagctccagggcctgactcctcgctctcattatcgtcta
cgcttcacctacagcaacagtaccttatttgaagaaaacattgagaccttaggaacagga
gtaactgaggtgcagcctagttttgcaacgcaaggctggttcatcggtgttgtgagcgcc
atcgtgctgctgctgctgatcctgctgatcctctgcttcatcaagagaagtaaagggggg
aagtattcagtgaaagataaagaagagggtccaatggactcagaagcacggcctatgaag
gatgagacttttggagagtatagatctctagaaagtgaccttgaggagaagcgcacggcc
agccagccgtccctcggcgaggagagcaagctgtgcagcgaggacaacctggacttcaac
ggcagcagtgccataaccaccgagctcaacatggacgagtctctggttagccagttcagt
cgtcccagcgagggtccagaggcgctgcatggcctgccagacaactccccactcaatccc
accgccgtttccccagccaccaatggcatgcccaactcggtcaccatcctcgattaa
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