Cyclopterus lumpus (lumpfish): 117733574
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Entry
117733574 CDS
T09199
Symbol
gpkow
Name
(RefSeq) G-patch domain and KOW motifs-containing protein
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117733574 (gpkow)
Spliceosome [BR:
clum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117733574 (gpkow)
Complex C
U4/U6.U5 tri-SnRNP related factors
117733574 (gpkow)
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Gene cluster
GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
G-patch
KOW7_SPT5
EIF4E-T
DUF4746
CCSAP
Motif
Other DBs
NCBI-GeneID:
117733574
NCBI-ProteinID:
XP_034393232
Ensembl:
ENSCLMG00005007858
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All DBs
Position
7:complement(18962358..18967885)
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AA seq
513 aa
AA seq
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MASHGEEADSPMSAPSGDQEERKPAAVSFGFTKTVNKFKPSTGDVIKKDDKDYLIGIDGK
ELQSSKPSEKPKELIIPLIQKNRWHRPDRAAQGEGEASGGKTPKTTEDNDSVESQAVKEL
IEDSRRQLELWQNGPQSDINLNLAIPLLMQNKVPDGFEDGDHVKVDLRPESSTEADYDSI
PVDAYGLAMLKGMGWNKEEGIGRTFKQHVAPIEHVLRPRGLGLGADRSAIKDLEPTRHKR
PPKPGDEKEKEEELVMGPGGCVLVESGAHKELYGKIEGIDADNARVVVKLAIGGRSATIS
QYAIKLVGRKEYDKNCKDLSRLSKTHKEKEKEKEKEKEQQRREEKERQSNGDEVKHKSSE
RDRGTDERKRKHRESSQDREKPPVKEARRPLAPPSWLQRDLKVRFIDKAFKGGRYYNSKM
CVEDVLAPAICVCRTEEGRLLDDVKQDMLETIIPKSENDSIMVVLGEHKGLVGRILQRDK
NKCRAMVQLDRHDEKLFTLDYDTICQYVGAEDR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcacggggaggaagcagattctcccatgtctgctccttctggggaccaagaa
gaaagaaaacccgcggccgtgtcgtttggtttcactaaaacagtcaacaaatttaaacct
tcgactggcgacgtgatcaagaaagatgacaaagattatttgatcgggattgacggaaaa
gaattgcaaagctcaaaaccgtccgagaagcccaaagagctcatcatccctctgatccag
aagaaccgctggcaccgaccggaccgggcggcccagggcgagggcgaggccagcgggggg
aaaacgccaaaaaccaccgaagacaatgactctgtggaatcccaggctgtcaaggagctc
attgaagactctcggaggcagcttgagctgtggcaaaacggccctcagtcagacatcaac
ctgaacctcgccatccccctgttgatgcaaaacaaagtgccggacggctttgaggatgga
gaccatgtgaaggtggatctacggccggaatcttcaacagaggccgactatgacagcatt
cctgttgacgcttatggactcgctatgctgaaagggatgggctggaataaagaggaaggc
attggacgcacctttaaacaacacgtggcgccaatcgaacacgtgctccgtccaagaggt
ttgggtcttggagctgatcgttcagcgataaaggacctggagcccaccagacataagcgc
ccccccaagccaggcgacgagaaggagaaggaggaggaactagtgatgggtccaggcggc
tgcgtgctggtggaatcgggggcgcataaagaactgtatggcaagattgaaggcattgat
gccgacaacgctcgagttgtggtgaagctggccatcggcggcaggtctgcaaccatcagc
cagtatgctatcaaactggtcgggcgcaaggaatacgacaaaaactgcaaagacctcagt
cgcctcagtaaaacccacaaggagaaagagaaggaaaaagagaaggagaaggagcaacag
agacgggaggagaaagagaggcaaagtaatggtgacgaggtaaaacacaagtcttcagaa
agagacagaggaaccgatgagaggaagaggaaacaccgagaatccagtcaagacagagag
aaaccgccagtaaaagaggcccgacgaccactggctccgccctcctggctccagagggac
ttgaaagttcgctttatagacaaagctttcaaggggggcaggtactacaactcaaagatg
tgtgtggaggatgttctggcaccagcaatctgtgtgtgtcgaaccgaggagggaagactg
ttagacgatgtgaagcaggacatgctggaaaccatcattcctaaaagcgaaaatgattct
ataatggttgtactgggcgagcacaaaggactggtcggccgaattctccaacgggacaag
aacaagtgccgggcgatggtccagctcgaccgacatgacgagaaattgttcactctggat
tatgacaccatttgtcaatatgtgggagcagaagaccgctga
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