Cyclopterus lumpus (lumpfish): 117733594
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Entry
117733594 CDS
T09199
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04310
Wnt signaling pathway
clum04519
Cadherin signaling
clum04520
Adherens junction
clum04916
Melanogenesis
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117733594 (lef1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
117733594 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117733594 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117733594 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117733594 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733594 (lef1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
117733594 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
DUF4718
Motif
Other DBs
NCBI-GeneID:
117733594
NCBI-ProteinID:
XP_034393261
Ensembl:
ENSCLMG00005012062
LinkDB
All DBs
Position
1:complement(17295859..17335232)
Genome browser
AA seq
359 aa
AA seq
DB search
MPQLSGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVHESESS
PNSNSHDAVRQSQIPQDSYHEKHRDHLEDAKLQDLYSKGHPYQGYPGYIMMSNMNDSYMN
NGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHPQDVNNKQGMQRHHPGP
DMSNFYSLSPGGVGQLTPPLGWFSHHMVPGPQGPHATGIPHPAIVNPQVKHEPLHETDIM
HMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHAL
SREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQESAPGTGQRMKTAYI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttatcaggcggcggcggagacccggagctgtgcgctacggatgaaatgatc
ccgttcaaagacgaaggagacccgcacaaggagcagatcttcgccgagctcagccactcg
gaggaggagggagacctggcggacatcaagtcgtctctggtccacgagtcagagagcagc
cccaacagcaacagccacgacgcagttagacagtcccaaataccgcaagattcatatcat
gaaaaacacagagaccatttggaggatgcaaaactccaagacctgtacagtaaagggcat
ccgtaccagggctacccgggctacatcatgatgagcaacatgaacgactcctacatgaac
aatggctccctctcgccgcccatgcccagaacgtccaacaaagtccccgtggtgcagccg
tcccatgcagtccacccgctcacgccactgatcacgtacagtgacgagcacttcgcccca
ggtcctcacccccaggatgtcaacaacaaacaaggaatgcagaggcatcaccctggacca
gacatgtccaacttctactccctgtctcctggaggagtcgggcagctcacgccaccgctg
ggatggttctcacaccacatggtgcccggcccccaaggtccccacgccacagggatcccc
cacccggccatcgtcaacccacaggtcaaacacgagcctctgcatgaaacagacatcatg
cacatgaaaccccagcacgaacagagaaaagagcaggagcccaaaagaccgcacatcaag
aagcccctaaacgccttcatgctctacatgaaagaaatgcgggcgaatgtggtcgccgag
tgcacgctgaaggagagcgctgccatcaatcagattctgggacgaaggtggcatgcttta
tctcgggaagagcaagctaagtattatgagctagcccgcaaggaaaggcagctccacatg
cagctctacccaggctggtccgctcgagataattatggaaagaagaagaagcggaagagg
gagaagatgcaggaatcggccccaggtacaggccagagaatgaaaacggcgtacatctga
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integrated database retrieval system
