KEGG   Cyclopterus lumpus (lumpfish): 117733600
Entry
117733600         CDS       T09199                                 
Name
(RefSeq) neural cell adhesion molecule L1-like
  KO
K06550  L1 cell adhesion molecule
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117733600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117733600
   04090 CD molecules [BR:clum04090]
    117733600
   04091 Lectins [BR:clum04091]
    117733600
Cell adhesion molecules [BR:clum04515]
 Immunoglobulin superfamily
  L1 family
   117733600
CD molecules [BR:clum04090]
 Proteins
  117733600
Lectins [BR:clum04091]
 I-type lectins (Siglecs)
  117733600
SSDB
Motif
Pfam: Ig_3 I-set fn3 Ig_2 ig Bravo_FIGEY V-set C2-set_2 Pur_ac_phosph_N C2-set_3 Ig_DSCAM-DSCAML_C Syndecan
Other DBs
NCBI-GeneID: 117733600
NCBI-ProteinID: XP_034393266
Ensembl: ENSCLMG00005005400
LinkDB
Position
7:26130654..26165676
AA seq 1294 aa
MCVSQRRWTGCRGPCPPSLPPVLLLLLLPLCFLSSSSPPLAEGAIDIPKDYKVHNMSQPP
ILTEMPRSYTAFSQEDIYLPCEASGNPAPTFRWVKDGEAFGSESKESGTLKAEDEETLDS
YEGDYRCYASNALGTAMTPRVQVIVEAQPVLLKQQKVSKRAREGESIILSCNPPQSSTPP
HIHWMDKKMVHIQQSDRVMVGLDGNLFFSNLLKSDSRDDYICNAQYAEARTVLPNRAVTL
TVTPSNDVIHARKPHLFRPSGSHTSVLALRQQSVTLECIPKGLPTPQVEWRKKDGRLEET
SGRSESHGRWLTFDLIDQNDDGEYECRAFNIHGSTSHSFTLTVEASPFWVKQPRSLLYSP
GETVRLDCQADGVPTPLLTWSINGQPVSEVDEDPRRSVAGGVLILEDVEFSDTAVFQCEA
ANKHGAVLLNAYLYVIELSPQILSSDGVVYKTTEGGTVTMHCESFGSPRPHVTWDGEARA
PLLSDPRVALLTNGSITLSGAGHEDTGEYSCSIKHSNISITAHLEVFNRTVMLSGPQEVR
ALRGSDALLDCSFYKDPQLLESQVVWRRDGHKLHESSPDDKYTFLENGTLKVSDIQSDDS
ASYSCEVFTDLDHVKASGSITVVARPDPPKDVSLSDVEDRSITLSWIPGHSHNSPTTEFI
VEVMELQHGPPAWAMLRSVPGDFNHVQLPLDPYCTFRFRVLAASEVGLSDPSRPSEEHRT
PPAVPAMNPGGVRSDSSHPKTLVITWEEMAQRAHGGEGFQYKVFWRKAGGPDARWNHSHV
ATPPFLVTEAGSYAPFEIKVQAVNSLGEAPPPEPEIGHSGEEEPEDPPTGVSTRVMNSTV
RVQWNEAQNVRGVLLGYKIYVRRLGPRGGRVRRSLVKLHREKVKEKEEKEKVKEEKEKDR
ESSMVLVVNGTKTSEEVGGLQLYSRYELSVTAFNSKGESPHSPPHNFSTPEGAPGPPASL
RFESPSEKSLVLYWTRPEESNGILLGYTVQYQQEVQNKDSPLQMETISDPAVTHMELDPL
DPSSHYVFKVIAHTAAGDGPPIELRGATLLEGVPPSHVSIVSSNTSLNLSWVPGERDRNH
GFVISYRRKRGGGREGGGGAGSDWMDSEVLNSTLGFYSLRGLQPGSLYHLLVKHGNTTQW
ENVTWTIGPEPSEMSGGFAAQGWLIGLISAILLLVLILLILCLIKRSKGGKYAVKDKEDK
EVDSEARPMKDENFGEYRSLESDGEEKRSGSQPSLNGESKLGSDDSLAEYGDSVDIQFNE
DGSFIGQYSGRGPAPHSGPASPANALPPPPQLHP
NT seq 3885 nt   +upstreamnt  +downstreamnt
atgtgtgtgtcacagcgtcggtggaccggctgtcgggggccgtgccccccctccctcccc
ccggtcctcctcctcctcctcctccctctgtgcttcctctcctcctcctctcctcccctc
gctgagggagccatcgacatccccaaagactacaaagtgcataacatgtcgcagcctccg
atcctgacagagatgccgaggtcgtacacggccttctctcaggaggacatctatctgccc
tgtgaggcctccggtaacccggcacccactttccgctgggtgaaggacggcgaggcgttc
ggctcggagagcaaagagtccggaacgctgaaggctgaagacgaggagacgctggactcc
tatgagggcgactaccgctgctacgcctccaacgccctggggaccgccatgacccccagg
gtccaggtcatcgtggaggctcaaccagttctcctgaagcagcagaaggtctccaagaga
gctcgcgagggagagagcatcatcttgtcctgcaaccccccacagagctccaccccaccg
cacatccactggatggacaagaagatggtgcacatccagcagagtgaccgggtgatggtc
ggcctggacgggaacctgttcttctccaacctgctgaagagcgacagcagagacgactac
atctgcaacgcccagtacgccgaggccaggacggtgctgcccaacagggcggtgaccctc
acggtgacgcccagtaacgatgtcatccatgccaggaagccccatcttttccgtcccagt
ggctcccacacctctgtgttggccctcaggcagcagagcgttaccctagaatgtatcccc
aaaggcctgccgaccccgcaggtggagtggaggaagaaggacggccgcctggaggagacc
agcggccgctctgagtctcacggccgctggctgacctttgacctcatcgaccagaatgat
gacggagagtacgagtgtagagccttcaacatccacggctccacctcacactccttcaca
ctcaccgtggaggcctcccccttctgggtgaagcagcccaggagcctgctgtactctccg
ggggaaacggtgcgtctggactgccaggcggacggcgtccccacgccgctgctcacctgg
agcatcaacgggcagccggtctcagaggtggatgaggaccctcgccgcagcgtggcgggc
ggcgtgctgatcctggaggacgtggagttctcggacaccgccgtgtttcagtgtgaggcc
gccaacaagcacggagccgtcctcctcaacgcctacctctacgtcatcgagctgtcgcct
cagattctgtcgtctgacggagtcgtttacaaaaccactgaaggaggaacggtgacgatg
cattgtgagtcctttgggtcaccacgcccacacgtcacatgggacggcgaggcccgggcc
cctctgctgtcggacccccgcgtcgccctgctcaccaacggctccatcacgctgtccggc
gccggccacgaagacactggagaatacagctgctccatcaagcactccaacatctccatc
acggctcacctggaggtcttcaaccgcaccgtgatgctttcagggccgcaggaggttcgt
gcgctcagaggaagtgacgctctgctggactgcagcttctacaaagacccccagctgctg
gagtcccaggtggtctggaggagagacggacacaagctgcacgagtcgtctccagatgac
aagtacacgttccttgagaatggcaccttgaaagtttccgacatccaatcagacgacagc
gcgtcttattcctgtgaagtcttcaccgacctggaccacgtgaaggccagcggctccatc
actgtcgtagctcgaccggaccctcccaaagacgtgtctctgtctgatgtagaagatcgc
agcatcactctgagctggatcccaggacactcacacaacagccccaccacagagttcatc
gtggaggtcatggagctgcagcacgggcctccggcctgggcgatgctgaggagcgtcccc
ggggacttcaaccacgtgcagctgcctctcgacccctactgcaccttccgcttcagggtc
ctcgccgccagcgaggtcggcctcagcgaccccagccgaccttcggaggagcaccgcacg
ccgccggccgtcccggccatgaaccccggcggcgtgcgcagtgactcctcccacccgaag
acgctggtcatcacgtgggaggagatggcccagcgcgcgcacggcggcgaaggcttccag
tacaaagtgttctggcggaaggccggcgggccggacgcacgctggaaccactcccacgtg
gccacgccccccttcctggtcacggaggcgggctcgtacgcgcccttcgagatcaaggtc
caggccgtcaactcgctcggagaagccccgcccccggagcccgagatcggacactcggga
gaggaagagccagaggacccccccacgggggtctccaccagggtgatgaacagcaccgtc
agagtccagtggaacgaggcccagaacgtccggggggttctgctgggatacaagatctac
gtcaggaggctcgggccacgtgggggtcgggtccggaggtctctggtgaaactgcaccgg
gagaaggtgaaggagaaggaggagaaggagaaggtgaaggaggagaaggagaaggaccgg
gagagcagcatggtgctggtggtcaacggcaccaagacctccgaggaagtgggcgggctg
cagctgtactctcgctacgagctgtccgtcaccgccttcaacagcaaaggggaaagcccc
cactcccccccacacaacttcagcacccccgagggagcgcctggtccccctgcatcgttg
aggtttgagagtccctctgagaagtccctggtcctctactggacccggccagaagagagc
aacggcatcctgttgggctacactgtgcagtaccaacaggaggtgcagaacaaagacagc
ccattgcagatggagaccatcagcgaccccgcggtgactcacatggagctggaccctctg
gaccccagcagccattacgtcttcaaggtgattgctcacaccgccgccggtgacggcccg
cccatcgaactcaggggcgccaccctgctggaaggagttcctccgtcacacgtcagcatc
gtgtccagcaacacgtcactcaacctcagctgggtgcccggagagagggacaggaaccac
ggctttgtcatcagttaccgcaggaagagaggaggagggagggagggaggaggaggagcc
gggagcgattggatggactcggaggtgttgaactccacgctgggcttctattcgctgaga
ggcctccagcccggatctctgtaccacctcctggtgaaacacgggaacaccactcagtgg
gagaacgtgacgtggaccatcgggccagaaccgtctgagatgtccggcgggttcgccgct
cagggctggctcatcggactcatcagcgccatcttgctgctggtgctgatactgctcatc
ctctgcctcatcaagcgcagcaaagggggcaaatacgcagtgaaggacaaagaagacaag
gaggtggactctgaggctcggcccatgaaggacgagaactttggagagtacagatctctg
gagagtgacggtgaggagaagcgctccggcagccagccgtcactcaacggggagagcaag
ctgggcagcgacgactcgctggccgagtacggagacagcgtggacatccagttcaacgag
gacggctccttcattggccagtacagcggccggggacccgccccccactccggccccgcc
tcccccgccaacgcgctgccgccgcccccacagctccatccatga

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