Cyclopterus lumpus (lumpfish): 117733600
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Entry
117733600 CDS
T09199
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117733600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117733600
04090 CD molecules [BR:
clum04090
]
117733600
04091 Lectins [BR:
clum04091
]
117733600
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
L1 family
117733600
CD molecules [BR:
clum04090
]
Proteins
117733600
Lectins [BR:
clum04091
]
I-type lectins (Siglecs)
117733600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
C2-set_2
Pur_ac_phosph_N
C2-set_3
Ig_DSCAM-DSCAML_C
Syndecan
Motif
Other DBs
NCBI-GeneID:
117733600
NCBI-ProteinID:
XP_034393266
Ensembl:
ENSCLMG00005005400
LinkDB
All DBs
Position
7:26130654..26165676
Genome browser
AA seq
1294 aa
AA seq
DB search
MCVSQRRWTGCRGPCPPSLPPVLLLLLLPLCFLSSSSPPLAEGAIDIPKDYKVHNMSQPP
ILTEMPRSYTAFSQEDIYLPCEASGNPAPTFRWVKDGEAFGSESKESGTLKAEDEETLDS
YEGDYRCYASNALGTAMTPRVQVIVEAQPVLLKQQKVSKRAREGESIILSCNPPQSSTPP
HIHWMDKKMVHIQQSDRVMVGLDGNLFFSNLLKSDSRDDYICNAQYAEARTVLPNRAVTL
TVTPSNDVIHARKPHLFRPSGSHTSVLALRQQSVTLECIPKGLPTPQVEWRKKDGRLEET
SGRSESHGRWLTFDLIDQNDDGEYECRAFNIHGSTSHSFTLTVEASPFWVKQPRSLLYSP
GETVRLDCQADGVPTPLLTWSINGQPVSEVDEDPRRSVAGGVLILEDVEFSDTAVFQCEA
ANKHGAVLLNAYLYVIELSPQILSSDGVVYKTTEGGTVTMHCESFGSPRPHVTWDGEARA
PLLSDPRVALLTNGSITLSGAGHEDTGEYSCSIKHSNISITAHLEVFNRTVMLSGPQEVR
ALRGSDALLDCSFYKDPQLLESQVVWRRDGHKLHESSPDDKYTFLENGTLKVSDIQSDDS
ASYSCEVFTDLDHVKASGSITVVARPDPPKDVSLSDVEDRSITLSWIPGHSHNSPTTEFI
VEVMELQHGPPAWAMLRSVPGDFNHVQLPLDPYCTFRFRVLAASEVGLSDPSRPSEEHRT
PPAVPAMNPGGVRSDSSHPKTLVITWEEMAQRAHGGEGFQYKVFWRKAGGPDARWNHSHV
ATPPFLVTEAGSYAPFEIKVQAVNSLGEAPPPEPEIGHSGEEEPEDPPTGVSTRVMNSTV
RVQWNEAQNVRGVLLGYKIYVRRLGPRGGRVRRSLVKLHREKVKEKEEKEKVKEEKEKDR
ESSMVLVVNGTKTSEEVGGLQLYSRYELSVTAFNSKGESPHSPPHNFSTPEGAPGPPASL
RFESPSEKSLVLYWTRPEESNGILLGYTVQYQQEVQNKDSPLQMETISDPAVTHMELDPL
DPSSHYVFKVIAHTAAGDGPPIELRGATLLEGVPPSHVSIVSSNTSLNLSWVPGERDRNH
GFVISYRRKRGGGREGGGGAGSDWMDSEVLNSTLGFYSLRGLQPGSLYHLLVKHGNTTQW
ENVTWTIGPEPSEMSGGFAAQGWLIGLISAILLLVLILLILCLIKRSKGGKYAVKDKEDK
EVDSEARPMKDENFGEYRSLESDGEEKRSGSQPSLNGESKLGSDDSLAEYGDSVDIQFNE
DGSFIGQYSGRGPAPHSGPASPANALPPPPQLHP
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcacagcgtcggtggaccggctgtcgggggccgtgccccccctccctcccc
ccggtcctcctcctcctcctcctccctctgtgcttcctctcctcctcctctcctcccctc
gctgagggagccatcgacatccccaaagactacaaagtgcataacatgtcgcagcctccg
atcctgacagagatgccgaggtcgtacacggccttctctcaggaggacatctatctgccc
tgtgaggcctccggtaacccggcacccactttccgctgggtgaaggacggcgaggcgttc
ggctcggagagcaaagagtccggaacgctgaaggctgaagacgaggagacgctggactcc
tatgagggcgactaccgctgctacgcctccaacgccctggggaccgccatgacccccagg
gtccaggtcatcgtggaggctcaaccagttctcctgaagcagcagaaggtctccaagaga
gctcgcgagggagagagcatcatcttgtcctgcaaccccccacagagctccaccccaccg
cacatccactggatggacaagaagatggtgcacatccagcagagtgaccgggtgatggtc
ggcctggacgggaacctgttcttctccaacctgctgaagagcgacagcagagacgactac
atctgcaacgcccagtacgccgaggccaggacggtgctgcccaacagggcggtgaccctc
acggtgacgcccagtaacgatgtcatccatgccaggaagccccatcttttccgtcccagt
ggctcccacacctctgtgttggccctcaggcagcagagcgttaccctagaatgtatcccc
aaaggcctgccgaccccgcaggtggagtggaggaagaaggacggccgcctggaggagacc
agcggccgctctgagtctcacggccgctggctgacctttgacctcatcgaccagaatgat
gacggagagtacgagtgtagagccttcaacatccacggctccacctcacactccttcaca
ctcaccgtggaggcctcccccttctgggtgaagcagcccaggagcctgctgtactctccg
ggggaaacggtgcgtctggactgccaggcggacggcgtccccacgccgctgctcacctgg
agcatcaacgggcagccggtctcagaggtggatgaggaccctcgccgcagcgtggcgggc
ggcgtgctgatcctggaggacgtggagttctcggacaccgccgtgtttcagtgtgaggcc
gccaacaagcacggagccgtcctcctcaacgcctacctctacgtcatcgagctgtcgcct
cagattctgtcgtctgacggagtcgtttacaaaaccactgaaggaggaacggtgacgatg
cattgtgagtcctttgggtcaccacgcccacacgtcacatgggacggcgaggcccgggcc
cctctgctgtcggacccccgcgtcgccctgctcaccaacggctccatcacgctgtccggc
gccggccacgaagacactggagaatacagctgctccatcaagcactccaacatctccatc
acggctcacctggaggtcttcaaccgcaccgtgatgctttcagggccgcaggaggttcgt
gcgctcagaggaagtgacgctctgctggactgcagcttctacaaagacccccagctgctg
gagtcccaggtggtctggaggagagacggacacaagctgcacgagtcgtctccagatgac
aagtacacgttccttgagaatggcaccttgaaagtttccgacatccaatcagacgacagc
gcgtcttattcctgtgaagtcttcaccgacctggaccacgtgaaggccagcggctccatc
actgtcgtagctcgaccggaccctcccaaagacgtgtctctgtctgatgtagaagatcgc
agcatcactctgagctggatcccaggacactcacacaacagccccaccacagagttcatc
gtggaggtcatggagctgcagcacgggcctccggcctgggcgatgctgaggagcgtcccc
ggggacttcaaccacgtgcagctgcctctcgacccctactgcaccttccgcttcagggtc
ctcgccgccagcgaggtcggcctcagcgaccccagccgaccttcggaggagcaccgcacg
ccgccggccgtcccggccatgaaccccggcggcgtgcgcagtgactcctcccacccgaag
acgctggtcatcacgtgggaggagatggcccagcgcgcgcacggcggcgaaggcttccag
tacaaagtgttctggcggaaggccggcgggccggacgcacgctggaaccactcccacgtg
gccacgccccccttcctggtcacggaggcgggctcgtacgcgcccttcgagatcaaggtc
caggccgtcaactcgctcggagaagccccgcccccggagcccgagatcggacactcggga
gaggaagagccagaggacccccccacgggggtctccaccagggtgatgaacagcaccgtc
agagtccagtggaacgaggcccagaacgtccggggggttctgctgggatacaagatctac
gtcaggaggctcgggccacgtgggggtcgggtccggaggtctctggtgaaactgcaccgg
gagaaggtgaaggagaaggaggagaaggagaaggtgaaggaggagaaggagaaggaccgg
gagagcagcatggtgctggtggtcaacggcaccaagacctccgaggaagtgggcgggctg
cagctgtactctcgctacgagctgtccgtcaccgccttcaacagcaaaggggaaagcccc
cactcccccccacacaacttcagcacccccgagggagcgcctggtccccctgcatcgttg
aggtttgagagtccctctgagaagtccctggtcctctactggacccggccagaagagagc
aacggcatcctgttgggctacactgtgcagtaccaacaggaggtgcagaacaaagacagc
ccattgcagatggagaccatcagcgaccccgcggtgactcacatggagctggaccctctg
gaccccagcagccattacgtcttcaaggtgattgctcacaccgccgccggtgacggcccg
cccatcgaactcaggggcgccaccctgctggaaggagttcctccgtcacacgtcagcatc
gtgtccagcaacacgtcactcaacctcagctgggtgcccggagagagggacaggaaccac
ggctttgtcatcagttaccgcaggaagagaggaggagggagggagggaggaggaggagcc
gggagcgattggatggactcggaggtgttgaactccacgctgggcttctattcgctgaga
ggcctccagcccggatctctgtaccacctcctggtgaaacacgggaacaccactcagtgg
gagaacgtgacgtggaccatcgggccagaaccgtctgagatgtccggcgggttcgccgct
cagggctggctcatcggactcatcagcgccatcttgctgctggtgctgatactgctcatc
ctctgcctcatcaagcgcagcaaagggggcaaatacgcagtgaaggacaaagaagacaag
gaggtggactctgaggctcggcccatgaaggacgagaactttggagagtacagatctctg
gagagtgacggtgaggagaagcgctccggcagccagccgtcactcaacggggagagcaag
ctgggcagcgacgactcgctggccgagtacggagacagcgtggacatccagttcaacgag
gacggctccttcattggccagtacagcggccggggacccgccccccactccggccccgcc
tcccccgccaacgcgctgccgccgcccccacagctccatccatga
DBGET
integrated database retrieval system