Cyclopterus lumpus (lumpfish): 117733603
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Entry
117733603 CDS
T09199
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
clum04530
Tight junction
clum04810
Regulation of actin cytoskeleton
clum05100
Bacterial invasion of epithelial cells
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117733603 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
117733603 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117733603 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117733603 (arpc1a)
05100 Bacterial invasion of epithelial cells
117733603 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117733603 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117733603 (arpc1a)
Membrane trafficking [BR:
clum04131
]
Others
Actin-binding proteins
Arp2/3 complex
117733603 (arpc1a)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
117733603 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_HPS5
RMC1_N
Beta-prop_EML
Rax2
Beta-prop_SPT8
Beta-prop_IFT122_1st
SH3_3
Motif
Other DBs
NCBI-GeneID:
117733603
NCBI-ProteinID:
XP_034393273
Ensembl:
ENSCLMG00005000757
LinkDB
All DBs
Position
1:21740464..21747612
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNCDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTVLSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAVGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTDFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDGEALTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagttcctgttggaacccatcacctgccacgcgtggaactgcgatagg
acacaaattgccatcagcccaaataaccatgaagtccacatctacaaaaagagtggcaac
cagtgggttaagactcacgaattgaaggagcacaatggacacataacaggtattgactgg
gctcccaaaagtgaccgcatagtgacgtgcggagcagaccgtaatgcctatgtgtggtcc
cagaaggaaggggtatggaagcccacactggtcatcctcaggatcaaccgagccgccacc
ttcgtcaagtggtccccactggagaacaagtttgcagttggaagtggtgctcgactcatc
tctgtctgctactttgagtctgagaacgactggtgggtgagcaagcacatcaagaagccg
gtacgctccaccgtcctcagtctggactggcatcccaacaacatcctgctggctgccggg
tcctgtgacttcaaatgcagggtgttctcagcctacattaaggaggtggaagagaaacca
ggccccacaccctggggcagcaagatgccatttggagctgtgctagcagaatttggagga
gcggttggaggcggttgggtccactctgtctctttctcagcatctggtaaccgcctggcc
tgggtcagtcatgacagcactgtcactgtggtggacagctctaagacggccagtccttca
cagctgaagacggacttccttcctctcctcagcgtcatttttgtttcggagaacagtcta
gtagccgcgggccacgactgttgccccatgctgttccgttgcgacgacggcgaggcgctg
acctttgtgtcgaagctcgacctccccaagcagagcatccagaggaacatctccgccatg
gagcgcttcaggaacatggacaagagagccaccaccgaggaccgcaacactgccctggac
acgctgcaccagaacagcatcacccaagtgtctatctatgaaggagacaaaagggattgt
cgcaagttctgcaccaccggcatcgacggagcgatgaccatttgggacttcaagagtcta
gaagcttctatccagggtctccgcatcatgtga
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