Cyclopterus lumpus (lumpfish): 117733617
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Entry
117733617 CDS
T09199
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117733617 (mkrn4)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117733617 (mkrn4)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117733617 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-RING_2
zf-C3HC4
zf-rbx1
zf-UDP
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-CCCH_3
zf-CCCH_2
zf-RING_11
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117733617
NCBI-ProteinID:
XP_034393287
Ensembl:
ENSCLMG00005015437
LinkDB
All DBs
Position
7:complement(12169098..12172676)
Genome browser
AA seq
371 aa
AA seq
DB search
MEGVWRYAQRSRRMDSVRSGSVCRHFMNGYCRFGPRCSYRHELQVIPPPICWYFQKGRCW
YGQRCRYLHVLHPAFDAAVAGRRGSVPTVSSRVAYAPPGRRGSEPALLQTELLSRQECNR
SQSVVNISNSHHGIGLLAADIAEEQSQDTDTPLTASWESVQSSEVAQACACDGRNEKETS
NETIDDGAAAAAFSPQGHIEEMEAFLQSKNVTCGICMDKVYDAKDPRNHLFGILPNCNHS
FCLQCIMTWRKTKDLGPDVVKSCPQCRVRSPFYVPNKHWVEGRAKEIVVAAFKAKYSNQT
CSYYSQYRFCPFKTECLYRHDKPGCHRSFPYYKDEDYDGVDLLNLFIAMSILREDDDDVA
LPFYLSEEYGS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagtttggcggtatgctcaacgctcacggaggatggactcggtccgtagtgga
agtgtctgcaggcatttcatgaatggctattgcagatttggtccaagatgtagttaccga
catgaattgcaagttataccaccaccaatatgttggtactttcaaaaaggtagatgctgg
tatggtcaacgatgcaggtatctccatgtccttcatcctgcatttgatgcagctgttgct
ggtagaagaggttcagtgcctacggtttcctccagagtggcttatgctccacctggcaga
agaggatccgagcctgctcttctgcagaccgagctgctgtccaggcaggaatgcaataga
tcgcagtcggtggttaatatctcaaattctcaccacggcattgggctcctggcagcggat
attgctgaggaacaatcgcaagatacggacactcctctcactgcttcttgggaatcagtc
cagagctcagaagttgctcaagcatgtgcatgtgacggaagaaatgagaaggagacttca
aatgagacaatagatgatggtgcagctgctgcagccttcagtcctcaagggcatatagag
gagatggaggccttcctccagagtaaaaatgtgacctgtggcatctgcatggacaaggtg
tatgacgcaaaggatccaagaaaccatctttttgggatcttgcccaactgcaatcactcc
ttctgtttacaatgcatcatgacctggaggaaaacaaaagacctcgggccagatgtcgtc
aagagctgcccacagtgtcgagtgaggtctcccttttacgtgccaaacaaacactgggtt
gaaggacgagcaaaggaaatcgtagttgctgccttcaaagcgaaatacagtaaccaaaca
tgcagttactacagccaatacagattctgtcccttcaaaacggagtgcctttatcggcat
gacaaacctggctgtcacaggtcatttccgtattataaagatgaggactacgatggtgtt
gatctacttaatcttttcatagccatgagcattctgcgggaagacgatgacgacgttgcc
ctccctttttacctatctgaggaatatggttcctga
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integrated database retrieval system
