Cyclopterus lumpus (lumpfish): 117733690
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Entry
117733690 CDS
T09199
Name
(RefSeq) acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00520
Amino sugar and nucleotide sugar metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117733690
Enzymes [BR:
clum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
117733690
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
CFAP143
Bin2_C
Motif
Other DBs
NCBI-GeneID:
117733690
NCBI-ProteinID:
XP_034393405
Ensembl:
ENSCLMG00005014577
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All DBs
Position
7:19610775..19613829
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AA seq
493 aa
AA seq
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MGKVLFVTALALLLHAQLGSSFILSCYFTNWAQYRPPPTIYMPNDVDPCLCTHLLYAFAT
IKNNELATYEWNDVELYGQFNALKNKNGNLKTLLSVGGWNFGSAGFSQMVLSSANRLTFI
KSVISFLRKYEFDGLDIDWEYPANRGGPPQDKQYYSVFLEEMRAAFESEAKQTNRARLLM
SAAVSAGKGTIESAYQIPKLGQALDMLNVMTYDFHGSWDPVTGECSPLFRGPEDHDSLIY
FNVDYAMNYYKNQGAPAEKLIVGFPTYGNTFTLRNPANHGVGAPIAGAGTPGKYTQEAGE
LAYFEICGFLKEGATEVWNTAQDVPYAYKGNQWVGYDNMKSFQLKVDWLTKSQFGGAMVW
TLDMDDYMGTFCNQGKYPLINVLKKGLNLEDASCAPPATPVPPIVGMSTTSGSGSGSGSG
SGSGKGSGSGSSTSGNTGTAGMDSGFCTGKAAGMYPNPKNKNQFYNCSNGRSYFNHCGAG
LVFDTSCTCCNWA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagtactgtttgtgacggctctggccctgctgctgcacgcgcagctcggctca
tccttcatcctatcgtgctactttacaaactgggcacagtacagaccacctccaaccatt
tatatgcccaatgacgtcgacccatgcctttgtacccatcttctgtatgccttcgccacc
ataaagaacaacgaactggccacctatgagtggaacgatgtggagctctacggtcagttc
aacgccctgaagaacaagaatggcaacctgaagactcttctgtctgttggaggatggaac
tttggctccgcaggattttcacaaatggttttgagctctgccaaccgtctgactttcatc
aagtcggtcatctcgttcctgaggaagtatgagttcgatggacttgacattgactgggag
tatccggccaacagaggaggcccccctcaggacaagcagtactactcggttttcctggag
gagatgagagccgcctttgagagtgaggccaagcagaccaacagggctcgtcttctgatg
tccgctgctgtgtcggctggaaagggcaccatcgaatcggcttatcagattcccaagctc
ggccaggccctggacatgttgaacgtgatgacatatgacttccacggctcctgggacccc
gtgactggcgagtgcagtcccctgtttagaggcccagaggaccatgacagtttaatctat
ttcaatgtggactacgccatgaactactataagaaccagggagccccggctgagaagctg
attgttggtttcccaacatatggcaacacattcactctgaggaaccctgctaaccatggc
gttggagcacccattgccggagctggaactccaggaaaatacacacaagaggctggagag
ctcgcttactttgagatctgcggctttttgaaagaaggagcaactgaggtttggaacacg
gcccaggatgtaccatatgcctataagggaaaccagtgggtgggctatgacaacatgaag
agcttccagctcaaggttgactggctgacaaagagtcaatttggaggcgccatggtgtgg
accctcgacatggatgactacatgggcactttctgtaaccagggaaaatacccactgatt
aatgttctcaaaaagggcctcaatctggaagatgcatcctgcgcccctcctgccactccc
gttcctccaattgtaggaatgagcacgacatccggctccggctccggctccggctccggc
tccggctccggaaagggctccggcagcggtagctccactagtgggaacactggcaccgct
ggcatggacagcggattctgcactggaaaggccgctggcatgtaccccaacccaaaaaac
aagaaccaattctacaactgcagcaacggcagaagctacttcaatcactgtggtgccggc
ctggtctttgacacctcctgtacttgttgcaactgggcttga
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