Cyclopterus lumpus (lumpfish): 117733737
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Entry
117733737 CDS
T09199
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117733737
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117733737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117733737
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
SR proteins
117733737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117733737
NCBI-ProteinID:
XP_034393468
Ensembl:
ENSCLMG00005000809
LinkDB
All DBs
Position
7:complement(8942041..8945521)
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AA seq
370 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGKLMEVDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVENARGPRRDRDGYGGGHADGGRSSGYSSRSRTGRDKYGPPVRTEYRVIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDMKRAIDKLDGTDINGRKIRL
VAEQPRKQRSYSGSRSRSRSRRRSRSKSRRSSRSRSRSHSRSRSHSNKRRRHSRSRSGRK
SRSKSDESKSRSRNRRSRSRSRSRSRKSKSRSGSRKSRSHSVDRKSKSRSKSPSKVKSDR
DSRSRSKEICGDKPRSHSASPMVNGKEESVTKSLARSPSPREDDRRSKSREKLPSPRSRS
RSRSRSASKD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttatatcggacgactgagctataatgtccgcgaaaaggacattcagcgt
tttttcagcggatatggaaagttaatggaagtggatttgaagaacggctacgggttcgtg
gagttcgaggacaaccgagacgccgacgacgccgtgtacgagctgaacgggaaggagctg
tgcggggagcgggtgatcgtggaaaacgcccgggggccgcggagagatcgagatggctac
ggtgggggtcacgcggatggtgggcgcagtagcggttacagcagccggagccgcactggc
agggataagtacggacctccagttcgtactgaataccgtgtcatcgtggagaacttgtcc
agccgctgcagttggcaagacctcaaggacttcatgcgtcaggcaggagaggtgacttat
gcagatgcccacaaggaacgcacaaatgagggtgtgatcgagtttcggtcccagtcggac
atgaagagggccattgacaagttggatggtacggacattaatggacggaagattcgtctt
gtggccgaacaacctcgcaagcaacggtcttactccggcagccgctccagatctcgtagt
cgccgccgctcccgcagcaagagccgcaggagctccaggagtcgctctagatcccactcc
aggtctcgttcccatagcaacaagaggcgtcgccattcccgctccagatctggaagaaag
tctcgctccaagtcagacgaaagcaaatcccgatcccgcaaccgcaggtcccgttctcgg
tcccgttctcggtcccgcaaatcaaagtcccgttcaggctcccgcaaatcccggtctcat
tcagttgaccgtaaatcaaagtcccgttcaaagagtccttcaaaggtgaagtcagatcgt
gattctcgcagtcgttcaaaggagatctgtggcgacaaaccccgcagtcattcagcatct
ccgatggtcaacgggaaagaggagagtgtcaccaagtctcttgcccgctccccatcgcct
cgtgaggatgaccgccgatccaagtccagggagaaacttccatcccctcgctcaaggtct
cgctcaaggtctagatcggcctctaaggattag
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