Cyclopterus lumpus (lumpfish): 117733743
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Entry
117733743 CDS
T09199
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117733743
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Gene cluster
GFIT
Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
117733743
NCBI-ProteinID:
XP_034393485
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Position
1:complement(14035673..14037921)
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AA seq
568 aa
AA seq
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MARLWHLMLLSWAWSPLCLSASVGFIGSPQECEKAHFVPGYNLGGEGFDIVTMQRKGAYV
IDTETWKLGNNTCRMFSNSYMKSERQKVPAAVVDWRILPKCSLKVSSTVYNSVESLVNDS
TSAVSNDWKIGLKIPLPSATIGVGFGGSHSKESNFAMQKSKQDHYTFLRHSVYCSFYRYR
LATHPPLSHDFVSAVNSLPSYSYQTLASYRSLIDTYGTHYITQVFLGGQIKAITSVKTCE
ATMSGLSATDVNDCLSVEASASFASTASIEAMTKQCQSKRNKLGYNQKFSIAFSERSTDV
IGGNIDGADILFEGQSNPSVYNNWINSLKYTPDVVQYSIHPLHTILPSRHFARDGLKQEV
EKYIEENAVLKKCSETCKIGHRSSKRDPCACVCNSDQNIKSNCCPAGRGRATLEVFQLYA
EGLYGDDWTQTDGSLEVKYGDQNKRTAIISNNDNPRWPETFEFGPIVITMQNKLTFTVYD
EDTYWDSDLLGQCSFDLRRGKVRDSCMLNHGTLFFSYIVKCAPSLDGDQCQEYIPSPMSL
SLAKVFHTRNGVLLGTGKSYAKSVGQSG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggccagactgtggcatctcatgctcctgagctgggcatggagtcctctgtgcctctca
gccagtgtgggcttcattggttcaccgcaagagtgtgaaaaggctcactttgtccctggt
tacaaccttggtggagaaggcttcgacattgtcacaatgcagcggaagggtgcttatgtc
atcgacacggaaacatggaagctcggcaacaacacttgcaggatgttcagcaacagctac
atgaaaagtgagcgtcagaaggtcccagctgccgtggtggactggaggatcctcccaaag
tgcagtttaaaggtctccagtacagtctacaattctgttgaaagtcttgtgaacgactcc
acctcagctgtgtcgaatgattggaaaattggcctcaagatccctttaccgtctgctact
attggtgttggctttggaggttcccactccaaagaatctaactttgccatgcaaaagtca
aaacaagatcactacaccttccttcgccattctgtctactgtagcttctatcgctacaga
ttggcaacacatcctccactgagtcatgactttgtatcagccgtgaactcccttccatcc
tattcatatcaaacattggcatcatatcgcagtctgatcgacacatatggtacacattat
attacacaagtgtttctcggtgggcaaataaaagcaatcacttctgtcaagacctgtgag
gcaaccatgagtggactgtcagcaacagacgtcaatgactgtttgtcagtcgaggcctct
gctagctttgccagcactgccagcattgaggcaatgacaaaacaatgtcagagtaagagg
aacaagttaggctacaatcaaaaattcagcattgcgtttagtgagcgcagcacggacgtc
attggtggaaacattgacggcgctgacatcctctttgaaggccaatcaaacccctctgtc
tataacaactggattaactcactgaagtacacacctgatgtggtccaatacagcatacac
cctctgcacaccatactgccaagccgccattttgccagggatggactgaagcaagaggtg
gagaagtacattgaggaaaacgcagtgttgaaaaaatgttcagaaacctgtaagattggt
cacagatccagcaaaagggatccttgtgcttgcgtttgcaacagtgatcagaatatcaaa
tcaaactgctgtcctgctgggagaggtcgtgcaacattagaggtcttccagctctatgca
gaagggttgtatggtgatgattggactcagacagatggttcactggaggtgaaatatgga
gatcagaataaacgcactgccatcattagtaacaatgacaatcctagatggccggagact
tttgagtttggacccattgtcattaccatgcaaaacaaacttacgttcactgtttatgac
gaggacacttactgggatagcgatctgttaggccagtgctcatttgatctgcgtagaggg
aaagtgagagactcttgcatgttgaatcatggcaccctcttcttctcgtacatagtcaag
tgtgcaccaagtctcgacggtgaccaatgtcaagaatatatcccatcccccatgagtctc
tctctggccaaggtcttccacaccagaaacggggtccttcttgggacgggcaagagctac
gctaaatcagtcggccagtcaggttga
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