Cyclopterus lumpus (lumpfish): 117733753
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Entry
117733753 CDS
T09199
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117733753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733753
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117733753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Hairy_orange
DUF7842
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
117733753
NCBI-ProteinID:
XP_034393504
Ensembl:
ENSCLMG00005002127
LinkDB
All DBs
Position
7:complement(9205471..9206180)
Genome browser
AA seq
199 aa
AA seq
DB search
MEIWAYKYRAQAEEKAAQIQLALRTEQERAELTAMAPTVFGQASYPKEHLAPAHKMRKPM
VEKLRRDRINTSIEQLKSLLSPEFVRQQPDSKQEKADILEMAVSYLRVWQHQKQQQKAGV
TSGPMAGGDSYSRCVQEAVSFLSHCEVQTQAHRRLLSHFQGLQASSHAPCTLSPPGSPLH
QISSGKRVRQASSALWRPW
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggagatttgggcgtataaatacagggcacaggcagaagagaaggcagctcagattcaa
ctggctcttcgaaccgagcaggaacgcgctgagttgacagctatggcacccactgttttt
ggacaagcaagctatcctaaggaacacctggctcctgctcataagatgagaaagccaatg
gtggagaaactgcgcagagaccgcatcaacaccagcatcgagcagctgaaatctctgctt
agtcctgagttcgtcaggcagcagcccgactctaagcaagagaaggcggacatcttggag
atggccgtgtcctatctgagagtctggcagcatcagaagcagcagcagaaggccggcgtg
acctctggcccgatggcgggcggcgacagctactctcgctgcgtgcaggaggccgtcagc
ttcctgtcacactgcgaggtccagactcaggcccaccgaaggctgctcagccacttccag
ggcctgcaggcgtccagccacgctccctgcaccctctcccctcccggctcgccgctccat
cagatcagctccggcaagcgtgtgagacaggccagcagcgccctgtggaggccctggtag
DBGET
integrated database retrieval system