Cyclopterus lumpus (lumpfish): 117733792
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Entry
117733792 CDS
T09199
Symbol
ythdf1
Name
(RefSeq) YTH domain-containing family protein 1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117733792 (ythdf1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117733792 (ythdf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
117733792
NCBI-ProteinID:
XP_034393573
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Position
7:complement(18783126..18788832)
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AA seq
619 aa
AA seq
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MQALFFFLLLHFTCIPPFNVTTKTTKGQDASKVFPVSVQNGSLHQKDTVHDNDFEPYLTN
QSNQNNSYQSMTDPYLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFM
HDTVFGQPGGLSSSIYPHRFNFFPENPAFSAWSTSGSQGQQTQSSAYGGSYSYPPSSLGG
TLVPDGQTGFHSDTLSKAPGMNSLEQGMLGLKIGGDVTGSGMGVKNSGSLGGGSVAAAVA
MGNGGTPIGMPPPKPTSWAAIASKPAKLQQQKTKNKPGTPIAGGGLPPPPIKHNMDIDTW
DNKGAVTKMAPPLPPHHHHHHQQPQLHSHVPSLLPPLQQSLQSAQSLVQQMTMQGPPQSY
QNHNSAPTPQTRWIAPRNRNLCYGGGSLDSSGSSNGGCVGNGGGVPPEPGSESHPVLEKL
RAAHSYNPKEFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRGMNSK
GPVYLLFSVNGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVNWLFVKDVPNSQLRH
IRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIAQYKHTTSLFDDFSHYEKKQEEEEVVKK
SYEPAPIQSRSRIDQDRQK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgttgtttttttttcttcttcttcatttcacatgcattcctcctttcaatgtg
acaactaagacaacgaaaggacaagatgcaagcaaagtctttccagtgtcagtgcagaat
ggctccctgcaccagaaggacacagttcatgacaatgactttgagccctatctcaccaac
cagtctaatcagaataacagctatcaatccatgacagacccttacctgtccagctactac
gccccctccattggatttccttaccctctcagtgaggctccttggtctacaggaggtgac
ccaccaattccctacctgacaccctatgcccccctcagcaatggagaccatcatttcatg
cacgacaccgtgtttgggcagccgggcgggctcagcagcagcatctatcctcacaggttt
aactttttccccgagaacccggccttctcagcctggagcaccagtggttctcagggccag
cagactcagagctctgcctatggggggagttacagctacccacccagctctctaggaggc
actctagtccctgatggtcagacgggtttccatagtgacaccctgagtaaggcaccaggt
atgaacagccttgagcagggcatgctgggcctaaaaataggtggggatgtgactggaagt
ggcatgggtgtgaagaactccggctcccttggaggtggcagtgtagctgcagctgttgcc
atgggcaacggcggcacaccaattggaatgccccctccgaaaccgacatcgtgggccgct
attgctagtaaacctgccaagctgcagcaacaaaagaccaagaacaaacctggcacaccc
atagccggaggaggtctgcctccaccccccattaaacacaacatggacattgatacatgg
gataataaaggggctgttactaagatggcccctcctttgcccccacatcaccaccaccat
caccaacagccccagcttcactcccatgttcccagtctcctgcccccccttcaacagtcc
ctacagtctgcccagtcccttgtgcagcagatgaccatgcagggtcctccacagtcctac
cagaaccacaactccgctccaacacctcagacccgctggatagccccacgcaaccgcaac
ttgtgctacggtggtggaagcttggacagcagcggctcctctaacggtggctgtgttggt
aacggcgggggagtgcctccagaaccaggatcagagtctcaccctgtgctggagaagctg
cgggcggcccacagctacaaccccaaggagtttgactggaacctgaagaacggacgcgtg
ttcatcatcaaaagctactctgaggacgacatccaccgctccatcaagtactccatctgg
tgcagcacggagcacggcaacaagcgcttggactccgccttcagaggtatgaactctaaa
ggtcccgtctacttgttgttcagtgtcaacggcagcggccatttctgcggcgtggccgaa
atgcgctcgcctgtggactacggcaccagcgctggcgtttgggcgcaggacaagtggaag
gggaagtttgatgtgaactggttgtttgttaaggacgtgcctaatagccagctgcgccac
atccgcctggagaacaatgacaacaagccagtcaccaactcacgtgacactcaagaagtt
cctctggaaaaggcgaagcaggtgctcaagatcatcgctcagtacaagcacaccacctcc
ctcttcgatgacttttcccactatgagaagaagcaggaggaggaggaggtggtgaaaaag
agctatgagcctgccccaatacagagccgatcccgaatcgatcaggatcgccaaaagtaa
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