Cyclopterus lumpus (lumpfish): 117733806
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Entry
117733806 CDS
T09199
Name
(RefSeq) protein snail homolog Sna-like
KO
K05707
snail 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117733806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733806
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
117733806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2HE
zf-met
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_15
Zf-C2H2_ZNF451_6th
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-GeneID:
117733806
NCBI-ProteinID:
XP_034393590
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All DBs
Position
7:24277430..24278790
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AA seq
269 aa
AA seq
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MPRSFLVKKSFPSRKPLYRESLLQSQAAFVPECFAQAELPTQNGSLALRCHPADPFFTDT
LPAPLSPITPASPSPLGPLDLSSSPSSTSSEEEEEEEEEEDGGRTSDPPSPDAIQHLYRC
LHCSNSYTSLSALSHHQASHHQASHHQSPPPAEVCARPAFHCKHCPKEYSSLGALKMHIR
SHTLPCVCTTCGKAFSRPWLLRGHIRTHTGERPFACQHCNRAFADRSNLRAHLQTHSEVK
KYQCGSCSRTFSRMSLLHKHGASGCRAAS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctccttcctggtcaagaagtccttccccagcaggaagcccctctacagggag
agcctcctgcagagccaagccgcttttgtcccagaatgctttgcacaagcggagctcccg
acgcagaacggcagcttggccctgaggtgccaccccgccgacccgttcttcacggacacc
ttgcccgcgccgctctccccgatcacgcccgcctccccgtcgccgctcggccctctggat
ctcagcagctctccgtccagcaccagcagcgaggaggaggaggaggaggaggaggaggag
gatggggggcgcacctcagacccccccagcccggacgccatccagcacctctaccgctgt
ctgcactgcagcaacagctacaccagcctctcggcgctgtcccaccaccaggcgtcccac
caccaggcgtcccaccaccagtcgcccccccccgccgaggtctgcgcccgtccggccttc
cactgcaaacactgccccaaggagtacagcagcctgggcgccctgaagatgcacatccgc
tctcacacgctgccctgcgtgtgcaccacctgcggcaaggccttctccaggccgtggctg
ctccgaggacacatccgcacgcacacaggcgagcgccccttcgcgtgccaacactgtaac
cgggccttcgccgaccgctccaacctgcgcgcccacctgcagacccactcggaggtgaag
aagtaccagtgtggctcctgctcgcgcaccttcagccgcatgtccctgctgcacaagcac
ggcgcctccgggtgccgtgccgcctcgtag
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