Cyclopterus lumpus (lumpfish): 117733928
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Entry
117733928 CDS
T09199
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117733928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117733928
Membrane trafficking [BR:
clum04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117733928
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
bZIP_1
RHG20_PH
MYCBP_helical
DivIC
bZIP_2
BMFP
Motif
Other DBs
NCBI-GeneID:
117733928
NCBI-ProteinID:
XP_034393762
Ensembl:
ENSCLMG00005018246
LinkDB
All DBs
Position
7:complement(21723936..21795006)
Genome browser
AA seq
1242 aa
AA seq
DB search
MESLAKNPNRAVEYLKELNRIIETQQELLERQRGRIEELEQQVAQLCAENARLKEQHQRH
LATCGLLQGSNSLVTLGAIKEHIARENRRHAPLPVDAPEAPRRSVQTAGCRRPVPCCKWK
SASFGVEGDGRPTESGPSLDGGASFGQGPVTHGSAISPDRFDGPLYSHGVQPGPQRPRRP
KLQHSQSILRKQAEEEAIKRSRSLSESYELSADLQDKQVEMLERKYGGRFITRHAARTIQ
TAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQLSFEGPEKVHSSYFEGRQVSMTED
GSPLSMVQSECGDIEVRQQANMASHPAPQGDLTDAITELEDAFSRQVKSLAESIDDALNC
RSLQGDEGPDPEATGCSKAERKVPYQVKSHRRAAGRMHDETLASYSDVTLFIDEEDMSPS
IALSRSGDQPSSTESDVRLRSANSSQDYWPIDPKDEGRDTDTSCRSTPSLECQEQRLRMD
HLPLLTIEPPSDSSAELSDRSDRGSVKRPPAYEPHGHIVTSSQASPKHISHGPPARTSSR
DNDDAPLRHRHRQLEGHLAINGSTNRQSKSESDFSDGDNDSINSTSNSNDTINCSSESSS
RDSLREQTLSKQTYHKETRNSWDSPIFSNDVIRKRHYRIGLNLFNKKPEKGIQYLTERGF
IPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFQSMELDEALRKF
QNHIRVQGEAQKVERLIEAFSQRYCICNPTVVRQFRNPDTIFILAFAIILLNTDMYSPNV
KPERKMKMEDFIKNLRGVDDGEDIPRETLVGIYERIRKRELKTNEDHVSQVQKVEKLIVG
KKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKLQKLGLHQREIFLFNDLLVVTKIF
QKKKNSVTYSFRQSFSLYGMQVMLFDNQYYPNGIRLTSALPGADIKVLINFNAPNPQDRK
KFTDDLRESIAEVQEMEKYRIESELEKQKGVVRPSMSQSSGLKKEGGNGNMNRASLDDTY
AMGEGLKRSALSSSLRDLSDAGKRGRRSSAGSLDSNMEGSIISSPHARRRAAAPREGAPP
QRGHPSSSTNAAPTSILGSLFGSKRSKPPSLSHAPFPPPAAAVAQPTLISHKPHPTNLHH
TAQVAHTVQLHGHHSQYCPQVPQNPPPYNHHHHYQPPPHTQHHQHPGYASQASQQPHSQH
SHYGQHSHHASHSQHAPHHHSQQAGSAPGGPKPKHSGISTVV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcctcgccaagaacccgaacagggctgtggagtatttgaaggagctcaacagg
atcatcgagacccagcaggagttgctggagaggcagaggggcaggatcgaggagctggag
cagcaagtggcccagttgtgcgcggagaacgcccgtctgaaggagcagcaccagcggcac
ctggcgacctgcgggctgctgcagggcagcaacagcctggtcacgctgggagccataaag
gagcacatcgcacgggaaaacaggagacatgcccccctccccgtcgacgccccggaggct
cccaggaggtcggtgcagaccgccggctgcagaagacccgtcccctgttgcaagtggaag
tcggcttcctttggtgtggaaggggatggtcggcccactgagagcggcccttccctggac
ggtggagccagcttcggccagggccccgtgactcacggctcggccatcagtccggaccgc
ttcgacggcccgctctacagccacggggtccagccggggccccagagaccccgtcggcct
aagctccagcactcgcagtccatcctccgtaagcaggccgaggaggaggccatcaagcgg
tcgcgctcgctctccgagagctatgagctctccgctgacctgcaggacaaacaggtggag
atgctggagcgtaaatatggtggacgattcataacccggcatgcggcccgcaccatccag
acggctttccggcagtatcagatgaacaagaactttgaacgtctcaggagctccatgtct
gagaaccgcatgtccagacgcatcgtcctctccaacatgaggatgcagctctcgtttgag
ggccccgagaaagtgcacagctcctacttcgaagggaggcaggtgtcgatgacggaggac
ggctccccgctgtccatggtgcagtccgagtgcggagatatcgaggtgcgccaacaggcc
aacatggcgtctcacccggcccctcagggtgacctgaccgacgccatcacggagctggag
gacgccttttccaggcaggtgaaatcgctggcggagtcgatagacgacgcgctgaactgt
cgcagccttcaaggggacgagggtccggacccagaggccacgggctgctccaaggcggag
aggaaagtgccctatcaggtgaagtcccaccgccgggcagctggacggatgcacgacgaa
acgctggcgtcctacagcgacgtcactctgttcatcgacgaggaggacatgtcgccctcc
atcgctctgtccaggtcaggggaccagccctccagcacggaatcggacgtgcggttgcgg
tcggccaactcctcccaggactactggcctattgaccccaaagacgagggtcgcgacacg
gacacgagctgccgcagcactccgtccctcgagtgccaagagcagcgcctccgaatggac
caccttcccctgttgaccatagaacctccgagcgacagctccgcggagctcagcgaccgg
tccgaccgcggctccgtcaagcggccgcccgcctacgaaccgcacggccacatcgtgacg
tcgtcccaggcgagcccgaaacacatttcccacggaccgccggcgcgaacgtcctcccgc
gacaacgacgacgcgccgctgcgccaccgccaccgacagctggaaggccacctggccatc
aacggctcgaccaaccggcagagcaagtccgaatcggacttctcggacggggacaacgac
agcatcaacagcacgtccaactccaacgacaccatcaactgcagctccgagtcctcgtcg
cgtgacagcctgcgagagcagacgctcagcaagcagacgtaccacaaggagactcgcaac
agctgggactcgcccatcttcagtaacgacgttatacgcaagagacactaccgcatcggc
ctcaacctcttcaacaagaagccagaaaagggcatccagtacctgacggagagggggttc
atccccgacacgccggtcggggtggctcacttcctgctgcagaggaaggggctgagcagg
cagatgatcggagagttcctcggcaatcggcagaagcagttcaacagagacgtcttggac
tgtgtggtggatgagatggacttccagagcatggagctggacgaggctctcaggaagttt
cagaaccacatccgcgttcagggtgaagcccagaaggtggagcggctcatcgaagccttc
agccagcgctactgcatctgcaaccccacggtggtgcgtcagttcaggaaccccgacacc
atcttcatcctggcgttcgccatcatcctcctcaacaccgacatgtacagccccaacgtc
aagcccgagaggaagatgaagatggaggacttcatcaagaatttgagaggtgtggacgac
ggggaggacatccctcgggagactctggtcggcatctacgagaggatccgtaagcgagag
ctcaagaccaatgaagaccacgtctcgcaggtgcagaaggtcgagaagctcattgtggga
aagaaaccaatcggatcactccaccacggcctgggatgtgtgctgtcgctgccccaccgc
cggctggtgtgttactgccgtctgtttgaagtgccggatcccaacaagctccagaagctg
ggcctgcaccagcgggagatcttcctgttcaacgacctcctcgtggtcaccaagatcttc
cagaagaagaagaactcggtgacgtacagcttcagacagtccttctctctgtacgggatg
caagtcatgctgtttgataatcaatattacccaaatggaatcagacttacatcagccctg
ccaggtgcggacatcaaagtcctcatcaactttaacgcgcccaacccccaggaccgcaag
aagttcacagacgacctgcgagagtccatcgccgaggtccaggaaatggagaagtacaga
atagagtccgagctggagaagcagaagggcgtggtgaggcccagcatgtcgcagagctcc
gggctgaagaaggaaggaggcaacggcaacatgaaccgcgccagcctggacgacacctac
gccatgggagagggcctcaagcggagcgccctcagcagctcgctgcgagacctctccgac
gcaggcaagcgggggcgtcgcagcagtgcaggatcactagacagcaatatggaagggtcc
atcattagcagtccgcacgcgcgccggagagccgccgcgccccgtgaaggcgcgcccccc
cagcgcggccatccctcctcctccacgaacgcggcgccgacctccatcctcgggtcgctc
ttcggcagcaagcgaagcaaaccgccgtctctgagccacgcccctttccccccccccgcc
gccgccgtcgcccaacccactctcatatcccacaagccccacccgaccaacctgcaccac
acggcgcaggtggcgcacacggtgcagctccacggccaccattcccagtactgtccgcaa
gtcccgcagaacccgccgccgtacaaccaccaccaccactaccaaccgcccccccacacg
cagcaccaccagcacccgggctacgcctcccaggcctcccaacaaccccattcgcagcac
agccattacggacagcattcccaccacgcctcgcactcccagcacgcgccgcaccaccac
agtcagcaagcgggttcggcgccgggcggacccaaacccaaacacagtggcatcagcacc
gtagtgtga
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