Cyclopterus lumpus (lumpfish): 117733955
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Entry
117733955 CDS
T09199
Symbol
wdr46
Name
(RefSeq) WD repeat-containing protein 46 isoform X1
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117733955 (wdr46)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117733955 (wdr46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
B-prop_COPA_B_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
117733955
NCBI-ProteinID:
XP_034393816
Ensembl:
ENSCLMG00005003869
UniProt:
A0A8C2YYS6
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All DBs
Position
7:complement(22275620..22282571)
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AA seq
596 aa
AA seq
DB search
MASLGGEALTVTHVEKKKKQPPARYWEDPPQQAGNGDNNRGTDGEQAGRQTEQQTPKAKK
RKENEDRGDGNKFLSGKADRFPGPAPIPEDRLQKFKRKEKMKKPRRQHYKLKDMIARSEE
NSEMSQIQAARLDLLLPEDAGFLEGDEGEDTCTISQEDIAESVDITSKTKYFDLKLSQFG
PYRVDYSQTGRQVLLGGRRGHIACIDWQSKQLTCEINVMESVNDVKWLHSEAMYAVAQKK
WLHIYDSNGIELHCIRKFNDVLRMQFLPYHFLLATASATSFLQYLDVSVGKEVAAICTKT
GRLDVMCQNPQNAVIHLGHANGTVTLWTPNQKEALVKMLCHHGAVRSVAVDKTGTYMVTS
GMDKKLKVFDIRTFKPLKSYFLPAGASCLSLSQRGLLSAATGDIVQVYRDVWSTPVTKPY
MAHRVQKTVWGTHFCPFEDVLGVGHGDGFTSMLIPGAGEPNIDGLDANPFRSAKQRQEWE
VKALLEKVQPELISLNPTELGMVDRAASEIKHQDRVKALGFDPLAKVKFVPKYKKKGRSS
SGNIEKRKRQVGHEDQRDDIRKTAEDRVKIEKERRQKEKKEAVLSSQKSALDRFRK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctcggcggtgaagcgttgactgttacacacgtggagaaaaagaagaagcag
cctccagctcgttactgggaggatcctccgcagcaagcggggaacggtgacaacaaccgg
gggacagacggagagcaggccggacgacagacggagcaacagacaccgaaagccaagaag
agaaaagaaaatgaagatcgaggagatggaaacaaattcttatcagggaaagcggaccgt
ttccccggccctgctcctattccagaagaccggctgcagaagttcaagaggaaagagaaa
atgaagaagcctcgccgtcagcattacaagctgaaggacatgatcgctcgctcggaagaa
aactccgaaatgagccagattcaagcagctcgtcttgacctcctactcccagaggatgct
gggttcctagaaggagatgaaggcgaggacacctgtacgatctctcaggaggacattgca
gagtctgttgatataacgtcaaagacaaagtatttcgacctgaagctgtctcagttcgga
ccgtatcgagtggattacagccagactggacgtcaagtgctgctcggcgggcggcgcggc
cacatcgcttgcatcgactggcagtccaaacagctcacgtgcgagatcaacgtcatggag
tccgtcaacgacgtgaagtggctccacagtgaggccatgtacgcggtggctcagaagaag
tggcttcacatctacgactccaatggaatcgagcttcactgcatccgcaagttcaacgac
gtcctccggatgcagttcctgccctaccacttcctgctcgccacagcgagcgcgaccagc
ttcctgcagtacctggacgtgtccgtggggaaggaggtggccgccatctgcaccaagacg
ggccggctcgacgtgatgtgccagaaccctcagaacgccgtcatccacctgggccacgcc
aacggcacggtgaccctctggacgcccaatcagaaggaggcgctcgtcaagatgctgtgt
caccacggcgccgtgcgctccgtcgccgtcgacaagacgggcacatacatggtgacatct
ggaatggataagaagctgaaggtgtttgacattagaaccttcaagcccctcaagtcctac
ttcctccccgccggagcgtcctgtttgtccctgagccagagggggctgctgtctgcggcc
acgggggacattgttcaggtgtacagggacgtgtggagcaccccggtgactaaaccctac
atggctcacagggttcaaaaaactgtgtgggggacccacttctgtccctttgaggatgtc
ctcggggtgggacacggagacggcttcaccagcatgctcataccaggtgcaggagagccg
aacatcgacggcctggacgcgaatccgttccgcagcgcaaagcagaggcaggagtgggag
gtcaaggcgctgctggagaaggtccagccggagctcatcagcctcaaccccaccgagctg
gggatggtcgaccgcgccgcctccgagattaaacaccaggaccgggtcaaagctctgggc
tttgacccactcgctaaagtgaaatttgttcccaagtacaagaaaaaaggtcgcagttcg
tccggcaatattgaaaagcgcaagagacaagtgggtcatgaggatcagagggacgatatc
cggaaaactgcggaggaccgcgtgaagattgaaaaagagaggaggcagaaggagaagaag
gaggcggtgttatcgagccagaaatccgctctggacagattcagaaaatag
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