Cyclopterus lumpus (lumpfish): 117733957
Help
Entry
117733957 CDS
T09199
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117733957
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
General mRNP proteins
117733957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
117733957
NCBI-ProteinID:
XP_034393822
Ensembl:
ENSCLMG00005006469
UniProt:
A0A8C2X252
LinkDB
All DBs
Position
7:22631461..22639237
Genome browser
AA seq
510 aa
AA seq
DB search
MADDFDVEAMLEAPFRKDEIKSSHANGHDDQNKKKRRSRTKSRSPGSRKRRSRSKDKKKS
KKRSKSRERKRSRSRERHRSGSRSKERSGRYRARKSPVRKRSKSRSPFKKEKSPIRNFED
AIGPFNKIREQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRN
SRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGP
MRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALE
QLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGL
KIPPAAQQALQMTGSIPFGNMSGPSSHSNQSQALNLPSQPLATHCLQLSNLFNPQAENDP
TWAVEIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKM
ITAAYVPLPTYHNLFPDSVTAKQLLMPTRR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccattcagaaaggatgagatc
aagtcctctcatgcaaacggacatgacgaccaaaacaagaaaaaaagaaggagccgaacc
aagagccgaagcccgggctccagaaagagaaggagccgaagcaaagacaaaaagaagagc
aagaagaggagcaagagccgcgagaggaagcggagccgcagccgagagcgccaccgcagc
ggctcccggagcaaagagcgctcggggcgctacagagcgcgcaagagcccagtccggaaa
cgttcaaaaagtaggagccccttcaaaaaagagaagagtcccatcagaaactttgaagat
gctatcgggccatttaacaaaataagggagcaacccatcgacaacctaacgccagaggag
cgggatgctcgcacagttttctgcatgcagctcgctgcgagaatccgagctcgagacctc
gaggacttcttctccgctgttggaaaagtgagagacgtgagaatgatctcagacagaaac
tcccggaggtcaaagggcattgcgtatatagagtttgtggagtcttcttctgtgccgctc
gctatcggcttgaccggccagcggctcctcggagttcccatcatcgtccaggcctctcag
gccgagaaaaatagagccgcagccgctgccaacaacctccagaagggcagctcgggtccg
atgcggctgtacgtcggctcgctgcacttcaacatcaccgaagaaatgcttcgagggatc
tttgagccgtttggaaagattgagggaatccagctgatgatggacagcgagaccggacgc
tccaaaggctacggcttcatatcgttcgccgacgcggaatgcgccaaaaaggccctggag
cagctgaacggcttcgagctggccggccggcccatgaaggtcggccacgtcacggagcgc
tcggactcgtcgacggccagctcgttcctggacaacgacgagctggagaggaccggcatc
gacctcggcaccacgggccgcctgcagctcatggctcggctagcggaaggaaccggcctg
aagatccctcctgccgctcagcaggctctacagatgaccggctccattcccttcggcaac
atgtccggtccttcatctcattcaaatcaaagccaagcgttgaacctcccgtcacagccg
ctggccacacactgcctccagctgtccaacctgttcaacccacaagctgaaaacgacccc
acctgggccgtggagatccaagacgacgtcatcgaggagtgcaacaaacacggaggaatc
gttcacatttacgtcgacaagaactcggctcaaggcaacgtgtacgtgaagtgtccctca
atcccggccgcgatggccaccgtgaacgcgctccatggacgctggtttgcaggcaagatg
atcacggctgcctacgtgccgttgccgacgtaccacaacctgttccccgactcggtgacg
gcgaagcagctgctgatgccgacgcgtcgatag
DBGET
integrated database retrieval system
