Cyclopterus lumpus (lumpfish): 117733960
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Entry
117733960 CDS
T09199
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117733960 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117733960 (mbd4)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117733960 (mbd4)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
117733960 (mbd4)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117733960 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
117733960
NCBI-ProteinID:
XP_034393831
Ensembl:
ENSCLMG00005019108
UniProt:
A0A8C3AE42
LinkDB
All DBs
Position
7:complement(22099149..22102704)
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AA seq
508 aa
AA seq
DB search
MATDVGGREKTQSQLVDNDLNSTPLKMLTSCDTRLETGDKKNNQSPKSEDASRRTSTLPR
GWIREVRRRKTGKTAGKMDIYITSPQGQKFRSRTSLHAFLLKDGEGILDINLFDFTASKD
DVAASRLAASKRGRRTRKKRHAVGQQEATDSPPNKSKRASSCLRSAAEDGEVKSGTPAAS
STTEDDVGPQESPHRAGQLRGKLLRPPPPSKEQNTPAAHEDEEADSRPPVPTLNVEPATE
SEDEDEESEGDYETDFELEADSRPPVPTLNVELATDSEGENEDEDEDGGGGEENIGDYYV
SFNLEADGHRDEEAALPDLAGGSCTPVSGSQNKSKSVEDKRKTSPYFSRKLCRDGPSPPR
RKAFRKWTPPRSPYNLVQETLFHDPWKLLVATIFLNKTSGKMAIPVLWQFFERYPSAEVT
READWKPVSELMKPLGLYELRAKTLVRFSDEYLAKEWRYPIELHGIGKYGNDSYRIFCVG
EWREVKPEDHMLNKYHGWLWENHEMLGI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatgtgggaggaagggaaaaaacccaaagtcagcttgtggataatgatttg
aacagcacacctctcaagatgctcacgagctgtgacacccggctggagaccggcgacaag
aaaaacaaccaaagtcccaaaagtgaagacgcctcccgccgtacgtccacgttgccccgt
ggctggatccgagaggttaggcggcggaaaacaggcaagacagctggcaaaatggacatc
tacattacaagcccccaggggcagaagttccgctccagaacatctctgcatgctttcctc
ctgaaagatggagaagggatcttagacataaacctctttgatttcaccgcatccaaggac
gacgtcgccgcttcccggttagccgcctccaaacggggacggaggacgagaaagaaaaga
cacgcggtcggacagcaggaggcaacggattcccctccgaataaatctaagagagcctct
tcctgcctcaggagtgccgctgaagacggagaagtgaagagtggcacaccagctgcatct
tcgaccacagaggacgacgtcggaccgcaggagtctcctcacagggcgggtcagctgagg
gggaagctgctccgaccgcctcctcccagtaaagaacaaaacactcccgcagcgcacgag
gacgaggaggccgactcgaggcctcctgtgccaacgctgaacgtggaaccggccactgag
agcgaggatgaggatgaggagagcgaaggcgactacgagactgattttgaactggaggcc
gactcgaggcctcctgtgccaacgctgaacgtggagctggccactgacagcgagggcgag
aatgaggatgaggatgaggatgggggaggcggagaggagaacataggcgactactacgtt
agttttaatctggaggccgacggtcatcgggatgaggaagcggcgttaccggacctcgct
ggtgggagctgcacaccagtcagcggttcccagaataagtccaagagtgtggaagacaaa
cggaaaacaagcccttatttcagcaggaaactctgcagagatggcccgagcccacccagg
aggaaggccttcaggaagtggacgccccctcgctcgccctacaacctggtacaggaaacc
cttttccacgacccctggaagctcctggtggccaccatctttctgaacaagaccagcggc
aagatggccataccggtgctgtggcagttcttcgagcggtacccgtccgcagaggtgacc
cgcgaggccgactggaagcccgtgtctgaactcatgaagcccctcggcctgtacgagctc
cgagccaaaacgctcgtacgcttctcagatgaatacctcgccaaagagtggcgttacccc
atcgagctgcacgggatcgggaagtacggcaacgactcctacaggatcttctgcgtgggc
gagtggagagaggtgaagcccgaagatcacatgttaaacaaataccacggctggctgtgg
gagaaccacgaaatgctcggaatctga
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