Cyclopterus lumpus (lumpfish): 117733966
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Entry
117733966 CDS
T09199
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117733966 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117733966 (ogg1)
Enzymes [BR:
clum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117733966 (ogg1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117733966 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
117733966
NCBI-ProteinID:
XP_034393843
Ensembl:
ENSCLMG00005003983
LinkDB
All DBs
Position
7:complement(22319017..22321767)
Genome browser
AA seq
425 aa
AA seq
DB search
MAEHALLSSGASAWRSLACAKSELRLDLALAGGQSFRWRETAEGHWTGVMGGRVWTLTQT
DDTLWYHVYKSSAGQGEVRDGERERKRRAGASLQVENKLGKEEPVAVTPVQDTEEEKEMM
EEEEEEMLRDYFQLKVKLGHLYKEWGAADPHFQSIADIFTGVRMLRQDPTECLFSFICTS
NNHISRIHGMVERLCRALGAPLCRLEETSYHDFPSLAALAGDGVEARLRDLGFGYRARFL
QRSAAQILEAHGPRWLEGLRGVPYLVARDALRTLPGVGTKVADCVCLMSLDKAEAVPVDT
HVWQIAKRDYSYAPGSRQKSITDKLHRDLGDFFRHLWGPHAGALLRRPQEVPEAERNVAP
EAAEERGRRGGGSGERERRRREKTEPRGTRKTRSGKRRRPPRRRERCEVNELLASGLASD
FNTTL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacacgcgctgctgtcatcgggggcgagcgcgtggaggtctctggcctgcgcc
aagtccgagctgcgtctggatctcgctctcgccggcggacagtctttccgctggagagaa
actgcggaaggccactggaccggagtgatgggaggacgagtgtggaccctgacccagacg
gacgacactctgtggtaccacgtgtacaagagctcggccgggcaaggggaggtgagggac
ggggagagggagaggaagaggagagctggtgcttccctccaggtggaaaacaagttgggg
aaggaggagccggtggcggtgaccccagtgcaggacactgaggaggagaaggagatgatg
gaggaggaggaggaggagatgctgagagactacttccagctgaaggtgaagctggggcac
ctgtacaaggaatggggagcggcagacccccacttccagagcatcgcagacatcttcaca
ggtgtgagaatgcttcgccaggaccccaccgaatgtcttttttccttcatctgcacctcc
aacaaccacatctctcgtatccacggcatggtggagaggttgtgccgggctctgggcgcc
ccgctgtgccggctggaggaaacctcttaccacgacttcccttccctggccgcgctcgca
ggcgacggcgtcgaggcgcgtctccgggacctgggctttgggtacagggctcggttcctt
cagcggagcgcggcgcagatcttggaggcccacgggccccggtggctcgagggcctgcgc
ggcgtcccgtatctggtggcccgcgatgccctccggaccctccccggcgttggcaccaag
gtggccgactgcgtgtgcctgatgtccctggataaggccgaggccgtgcccgtagacacg
cacgtgtggcagatcgctaaacgcgactacagctacgctcccggcagccgacagaagagc
atcacggataaacttcaccgagatctcggggactttttcagacacctgtggggtcctcat
gcaggtgctcttctgcgccgacctcaagaagttccagaggctgaaagaaacgtcgcccct
gaagcggccgaagaaagaggaagacgaggaggcggaagtggcgagcgcgaaagacgaaga
cgggagaaaacggaaccgcgaggaacgcggaaaacccggtcgggaaagcgaagacgtccg
cctagaaggagagagcggtgtgaggtaaacgagcttcttgcatcgggactcgcatcggat
ttcaataccacactttag
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