Cyclopterus lumpus (lumpfish): 117734033
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Entry
117734033 CDS
T09199
Symbol
fgd
Name
(RefSeq) faciogenital dysplasia
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117734033 (fgd)
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Paralog
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Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
FYVE_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
117734033
NCBI-ProteinID:
XP_034393975
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Position
7:21957785..21979887
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AA seq
968 aa
AA seq
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MARGSTFLPDPHARIPPLAHWAELGGQGFFRYRLPGRACVCVCVCVCVCVIFPFTRSLDF
GCVEANGWRHDLPASSLQYQCGSVDYLCSPRLAKKGPTPRQCHDRPAIKPRPQPSTSPRP
PAAQKPQVPPKPSHLLALGQDKKPKRIPPPPSRPLPAPPPPPKPKPGVAAQPQKEAQKVG
LLIERFENSRVPILGVLPRSQLHLCLRMDTASDITSSCGQEPTAKVAGDPAAVDTLALGA
PERTHAAGASELSRPASVHIDGSDDAPLDDCGVAHGVGCLGDVEGSSSSSRELLDNPDPS
EQNGKIPNRDSGIDSPSCAAEGEAFPNEDAIDEEDHYDSVTETESVSCCVALGNKRDSTQ
DEDSDLDEGSSGEIHSLTDTQAGYLTDAHSEAHKCSETQNLLNIAKELLHTEEAYVKRLN
LLDQVFCTKLTETGIPQDVITGIFSNISSIYCFHDKFLLPELKTRITGEWDSNPRIGDIL
QKLAPFMKMYGEYVKNFDRAMDLVNTWTQRSSQFKSVVQNIQKQDVCGNLTLQHHMLEPV
QRIPRYELLLRDYLKKLPEDALDRKDAEKALELISTAAHHSNAAIRKMEKMHKLLEVYER
LGGEEDIVNPANELIKEGHIKKMSAKNGTAQDRYLYLFNNMVLYCVPKLRLMGQKFSVRE
RIDIAGMEVQENVKQNLPHTFAIIGKQRSLELQARTAEEKEDWIQVILATIERHKQNSET
FNKAFNSSFSREDDHPLSHRKGPWCNTSIDSDGERLHERKSSRKKEKEKQTCKGCNESFN
FTKRKHHCKSCGAAICAKCSKTLDNKTSRVCPECFEASVSLETLGVSEQKRKAVPERQTS
LTGENCLLCGHLQVQEKGKSWSKMWVAVTKAEPLVLYLQSSGQDSKGARALPLPGFEVGA
AVTPPPSSGGEKAEVKHAFRLSHTQQTLLLSAPDAELQAKWVDVLSRAARGETPADASTS
LTEHRKSQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaggttcaacattcctccccgacccacatgctcgcattcctcctttggcgcac
tgggctgaactgggagggcagggtttctttcggtatcgactgccgggtcgtgcgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatttttccgttcactcgctctttggacttt
ggatgtgtggaagccaacggctggaggcacgacctccccgcctcctctctgcagtaccag
tgcggatcggtggactacctgtgctctccacggctggcgaagaaaggtccgactcccaga
caatgtcacgacaggcccgccatcaaaccccggccccagccctccacctcgcccagaccg
ccagccgcacagaaaccacaagtgccccctaaaccgtcgcacctgctcgccctcgggcaa
gacaagaaacccaagaggatcccgccgccgccctcgcggccccttcccgcaccccctcct
ccgccgaaaccgaagcccggcgtcgcagcgcagccgcagaaagaggcccagaaggtgggg
ctgctcatcgagaggttcgagaattcaagggttcccatcctgggggtgctcccgcggtcc
cagctgcacttgtgtctgagaatggacaccgcgtccgacatcacttcctcctgcggccag
gaacccacggcgaaggtcgcaggagaccccgccgccgtggacacacttgcacttggcgcc
cccgaacggactcacgcggcgggggcgtccgaactctcccggccggcctccgtgcacatc
gacggctcggacgacgccccgctggacgactgcggcgtcgcgcacggcgtcggttgcctc
ggcgacgtggaaggctcctcctcctcctcccgcgagctcctggacaatccggacccctcg
gagcagaacgggaagattcccaaccgggacagcggcatcgacagcccgtcctgcgcggcg
gagggggaggcgttccccaacgaggacgccatcgacgaggaggaccactacgacagcgtc
acggagacggagagcgtgtcctgctgcgtcgccctgggcaacaagcgagactcgacgcag
gacgaggacagcgacttggacgaggggagcagcggggagatacactctctcacggacacg
caggccgggtatctgacggacgcacactcggaggcgcacaaatgctcagagacccagaat
ctcctgaacatcgccaaagagcttctccacactgaagaggcctacgtcaagcgactcaac
ctcctcgaccaggtattttgcactaagctcacagagactggaatccctcaggacgtgatc
acaggaatcttctccaacatctcctccatctactgcttccacgacaagttcctgctgccg
gagctcaagacgcgcatcactggagaatgggactccaaccctcgcatcggagacatcctc
cagaaactggctccgttcatgaagatgtacggagaatatgtgaagaactttgaccgagcc
atggacctggtcaacacctggacgcagcggtcctcgcagttcaagagcgtcgtccagaat
atacagaaacaggacgtgtgtgggaacctgacgttgcagcaccacatgctggagccggtc
caacggatccctcgctacgagctgctgctcagagactacctgaagaagctgcccgaggac
gctctggaccggaaagacgcagagaaggcactggagctcatctcgactgcagctcaccat
tccaatgcagcaatcaggaaaatggagaagatgcacaagctgctggaggtttacgagagg
ctcggaggagaggaggacatcgttaacccggccaacgagctcatcaaagagggtcatatc
aagaagatgtcagccaaaaacggaacagcacaagaccgatacctctacttgttcaacaat
atggtgctttactgcgtgccgaaactccggctgatggggcagaagttcagcgtcagagag
cggatcgacatcgccggaatggaggtgcaggagaacgtgaagcagaaccttcctcacacg
ttcgccatcatcggcaagcagcgatcgctggagctgcaagcgaggacagctgaggagaaa
gaagattggattcaggtgatcctggccaccatcgaaaggcacaagcagaacagcgagacg
ttcaataaagcgttcaacagctccttctcccgggaagatgaccaccccctgagtcaccgt
aagggtccctggtgcaacacatccatcgactcagacggggaaagactgcatgagaggaag
agttccaggaaaaaggagaaagagaagcaaacgtgtaaaggctgcaacgagagcttcaat
ttcaccaagcgcaaacaccattgcaagtcctgtggagcggccatctgtgcaaagtgttca
aagaccttggacaacaaaacgagccgcgtgtgcccggagtgtttcgaagccagcgtcagc
ctggagactctcggcgtcagcgaacagaaaaggaaagctgtgcctgagagacagacgtct
ctaacgggggagaactgcctgctctgtggccaccttcaagtgcaggagaaagggaagagc
tggtccaagatgtgggtggctgtcaccaaggctgagccactggtgctgtacttgcagagc
agtggacaggactccaagggcgcgagggcgctgcctctccccgggttcgaagtgggcgcc
gccgtgacgccgccgccgtcgtcggggggcgagaaggccgaggtcaaacacgccttccgc
ctcagccacacccagcagactttgctcctaagtgccccagacgcagagctccaggccaag
tgggtggacgtcctctccagggcggcccgcggggaaacgccggcggacgcgtcgacgagt
ctgaccgaacacaggaagagccagtag
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