Cyclopterus lumpus (lumpfish): 117734284
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Entry
117734284 CDS
T09199
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117734284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117734284
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117734284
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117734284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8_fungal
PHD_NSD
zf_RING_Vps8
zf-UDP
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117734284
NCBI-ProteinID:
XP_034394316
Ensembl:
ENSCLMG00005019628
UniProt:
A0A8C3AHG2
LinkDB
All DBs
Position
1:complement(1818880..1851257)
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AA seq
825 aa
AA seq
DB search
MDALFPLRADPLEGVHFLPFDYIKGIFWALWRARGKEPWWTREAERVDVLHEEVSGDHEV
SWTRRVDPEVHINRANSNNMLLASVVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSSDPRG
GSVVLGQVDSRLSPYIIDLQSMHQFRQDTGTIRPVRRSFYDPASAPGQGWQWEWENDAGT
WTAYDMEVAIAIENAHNRQQPCLDLTPLGFCYLIDYQTMTQVNRQSQTFRRLQRRADMSY
PLVSGPLPIPKGGGVGGGGGLTGALLGVGVSGVSMGIGSSVSPNGGLPTTVLGQPCSCQQ
CMLVFSVKTNTAGAGVGGAGIPTLGRRSLTIQRPKNSVLVSSKLLSPSKSATLGRGQQQN
SNTSYYQTLPHGLAISRNIASPRRNAQLFAQSLAALTAGTSSLGISLSSNRPPLPSLPPP
QPPSSKPIPNPPSIPAKHSSSSASESVPTATLVSPANSVTTPPSPVPSPSPMVMKPQRTP
SSVCHAPLPQRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGIT
GILMSAAALPVCLTRPPKLVLHPPPVSKSDVKPVPGFGHCCKKTTKKQACKGKTPEEVVK
KYLQKVKSPPEEDCTICMEPLGGPSGYKGPGVGPMSRAESVGRLAQCGHQYHFQCLVAMY
NNGNKDGSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGLQG
PEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLIAWDRRLIFSVGTSSTTGESDTVIW
NEVHHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEEDGLMEK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggacgcactatttcccttgcgcgccgacccattagagggagtccacttcctcccgttt
gattacataaagggcattttttgggctttgtggagggcgagagggaaagagccatggtgg
acccgagaggccgagagggtggatgtacttcatgaagaggtctccggcgatcacgaagtg
tcctggactcggagagtggacccagaagttcatatcaacagggccaacagtaacaacatg
ctcctggcctccgtcgttgtggtgtgggaatggctgaacgaacacggtcggtggcggccc
tacagccccgctgtctcccaccagatagaggcggccatacggagcagcgaccctcgcgga
gggagcgtggtcctcggccaggtggacagccgtctctcgccgtacatcattgatcttcag
tccatgcaccagttccgacaggacacgggaaccatccgtccggtgcggaggagtttttac
gacccagcctcggccccgggtcagggctggcagtgggagtgggagaacgatgcgggtacg
tggacggcctacgacatggaggtggccatcgccatcgagaacgcccacaaccggcagcag
ccctgcctcgacctgacgcccctcggcttctgctacctcattgattatcagaccatgaca
caggtgaacagacagagccagacatttcggaggctccagagacgtgctgacatgtcctac
cctctagtgtccggtccccttccaatacccaaaggaggcggtgtcggaggaggtggaggc
ctaacaggagccctgcttggtgttggggtgtcaggggttagtatggggattggaagctct
gtctcccccaatgggggattgccaactactgtacttggccagccttgttcctgccagcag
tgcatgctggtctttagtgtgaagaccaatacagcaggagcaggggtaggaggagcaggg
ataccgactctaggtcgacgctcactaaccatacagcggcccaagaactcagtactggtc
tcctctaaactactgagtccgtctaagtccgccactctggggcgaggacagcagcagaac
tccaacaccagctactatcagacgctgccgcacggtctcgccatctccaggaacattgcc
tccccgagaaggaacgcccagctctttgcacagtcactggctgcgctcaccgcaggcacc
tcctctctgggtatctccttgtcttccaatcggccgcctctgccgtccctcccacctcct
cagccgccatcatccaaaccgatcccgaaccctccgtccattcccgccaagcattcctcg
tcttcagccagcgaatcggtgccaaccgccacattggtttcccctgcaaacagcgtgacc
acgcccccctctcccgtgccatctccgtcgccaatggtgatgaagcctcagcgcacaccg
tcgtcagtgtgccatgccccgttgccacagagatcaagcttagccgggctgagcagacca
gcgttacagagaatagcgatggctcagtccagagcgctcatagcatcaggtgtgcccacg
gtcccagtgaagaacctcaacggatccagtcctgtccaccccgcactggccgggatcaca
ggtatcctgatgagcgccgcagctctgccagtgtgtctgaccagaccgccaaaacttgtg
ctgcaccctccgcctgtcagcaagagcgacgtcaagcccgtgccaggctttggccactgt
tgcaagaagaccacaaagaaacaggcttgcaagggtaaaactccagaggaggtggtaaag
aagtacctgcagaaagtaaaaagtccaccagaggaggactgtaccatctgtatggagcca
ctggggggtccatctggatacaagggtccgggggtggggcctatgtctcgggcagagtca
gttgggcgactagcacagtgtggacaccagtaccatttccaatgtctggtggccatgtat
aacaatggcaacaaggacggcagtcttcagtgtcccacctgtaaaaccatctacggtgtg
aagacaggcaaccaaccggcagggaagatggagtaccacgtcatcccccactctctaccg
gggcaccccgactgcaaaaccatacgcatcatctacaacataccgccaggccttcagggc
ccagagcatccaaacccagggaagcccttcacagcccgaggcttcccccgacactgctac
ctcccggacagcgagaaagggcgcaaggtactgagactgctcctgatagcgtgggaccgc
aggttgatcttctcagtcgggacttcgagcacgactggagagtctgacaccgtcatctgg
aacgaggtccaccacaagacagagtttggctccaacctgacgggccacggcttccccgac
cccggacacctggacaacgtcctggaagagctccgagctcagggcatcacagaggaggac
ggactgatggagaagtga
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