Cyclopterus lumpus (lumpfish): 117734489
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Entry
117734489 CDS
T09199
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117734489 (ubtf)
03021 Transcription machinery [BR:
clum03021
]
117734489 (ubtf)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
117734489 (ubtf)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
117734489 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117734489
NCBI-ProteinID:
XP_034394400
Ensembl:
ENSCLMG00005013023
LinkDB
All DBs
Position
8:complement(17241675..17252127)
Genome browser
AA seq
828 aa
AA seq
DB search
MEREELLRVEWRETASEMEAGGKDHLCGDWSPGPTAQCWLSFNPPLLPPQRRRGSRRETA
KPTKQPLGFIHRIPRRTMNGEMEAKTEEIGGISTLWAQEDLLQLLEAMQLALPPKDLTKY
KTTESHLDWQKVAFNSFTAEMCKQKWLLVSKKIRKFRTLTELIFDAQDYIKNPYKGKKLT
KHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYRELPEKKKKKYLEDFS
RDKETFVHSMTKFRELHPGLMESMTKKGSNAPEKARTPQQLWFTHEKKAVLKTRPDATTK
DIKDTLGKQWTQLSDKKRLKWIAKSLEQQKLYQGTMREYIQQHPESNITQEDILKSTLTK
AERHLKDKSDGRPDKPPPNGYSMYCAELMSSMKDVPSTERMVMCSQRWKLLKQGEKDAYQ
KRCEQRKKDFEIDMNRFLSSLSEEEQHRVLSEEKLGFKRGGANSSAAKRRASKAKANPEK
PKRPISAMFIFSEERRPKLQQERPDLSDSELTRLLARMWNELPDKKKEKFKRMEAILKSE
SEKKEDRSRLPDPPKTAQDIWQQSVIGDYLARFKSDRPKAQKAMEATWSTMEKKEKIMWI
KKAAEDQKRYERDLCEMRSPAAAIASGKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHL
PMKERMTEIGSRWQRLTLKDKDRYKKIAEEKQKLYKVVLEQWLASLSSQERNTYKEYNSQ
KRRTTAKPGGPKAKAKKSDTEEEEEEDDDEEDDDEREKASSEADSSSDDDDDDDDDDDDD
DDDDVFVICLKKDEDDEEDDDEAEDKENKSEDSSSESNSQGSSDSDSD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaggagctgctgcgcgttgagtggagggagacggcgagtgagatggaggcg
ggggggaaggaccatctctgcggggactggagcccaggaccgacggcgcagtgctggcta
tcgttcaaccctccccttcttcctccacaacgacgccgaggctcacgccgagagacagct
aagccaacaaaacaaccgctcgggttcatccaccgtataccacgccgtacaatgaatgga
gaaatggaagcaaaaactgaagagataggtgggatttcgacattgtgggcacaggaggac
ctcttacaactgcttgaggccatgcaactggccctgcctccgaaagacctgacaaaatac
aaaacaacggagtcccacctcgactggcagaaggtggccttcaactccttcacagcagag
atgtgtaagcagaagtggctgctggtctctaaaaagattcgtaaatttcggactttgacc
gaactcatatttgatgctcaagactacatcaagaacccttacaagggcaaaaagctcaca
aaacacccagatttccccaagaagcccttgactccatacttccgattcttcatggaaaag
agggccaaatacgcaaagttgcacccagagatgagtaacctcgatctaactaaaatcctt
tccaagaagtaccgggagctgcctgaaaaaaagaagaaaaagtatcttgaggacttttca
cgagacaaggaaacatttgtgcacagcatgacgaagttcagagaactgcaccctggcctc
atggaaagcatgaccaagaaaggctcaaatgcaccagagaaggccagaacaccccaacag
ctgtggttcacccatgaaaagaaggctgtcctcaagacacgtccggatgcgaccaccaaa
gacattaaggacacactcggcaaacagtggacgcagctgtctgacaagaagagactcaaa
tggattgccaagtccctggagcagcagaaactgtatcaggggacaatgcgggagtacatc
cagcagcacccggagtccaacattacccaagaggatatcctcaagtccaccctgaccaag
gctgagaggcacctcaaagacaaatctgatggccgacctgacaaaccccctccaaatggt
tactcgatgtactgcgccgagttgatgtcgagcatgaaggatgtacccagcacagagcgt
atggtgatgtgtagccagcggtggaagctgctgaaacagggggagaaagacgcctaccaa
aaacgctgtgaacaaaggaagaaggactttgaaattgacatgaaccgatttctaagtagt
ttatcagaggaggagcaacaccgggttttgtccgaggagaaactaggttttaagaggggc
ggagccaacagttctgctgccaaaaggagggcctctaaagccaaggccaatccagagaaa
cctaaaaggccaatttcagccatgttcatcttctctgaggaaaggcgtccgaaactgcag
caggagcgtccggacctttccgacagcgagctcacacgacttctggctcgcatgtggaat
gagctgccagacaaaaagaaggagaagtttaaacgcatggaagcgatcctgaagtcggag
tcggagaagaaggaggatcgcagtcgtctgccggacccacccaagactgcacaggacatc
tggcagcagagtgtcataggagactacctggccagatttaagagtgaccgaccaaaggca
cagaaagccatggaagcaacctggagcaccatggagaaaaaagagaaaattatgtggatc
aaaaaggcagcagaggaccagaaaagatacgagagggacctgtgtgagatgcgctcacct
gctgctgccattgcctcaggaaagaagatgaagtttgagggggaacccaagaaaccacca
tcaaacggatatcagaagttctctcaggagatgctgtccaacggtgaactgaatcacctc
ccgatgaaggagcgcatgactgagatcggcagccgctggcagaggttaacgctgaaggac
aaggaccgctacaagaagatcgctgaggagaagcagaagctgtacaaagttgtactggaa
cagtggctcgctagtttgtcttcacaagagagaaacacttacaaagaatataattcacaa
aaaaggagaactaccgcaaaaccaggaggtccaaaggcaaaggccaagaaatctgacacg
gaggaagaggaggaggaggatgacgatgaagaagacgacgatgagcgggagaaagcttct
tctgaggccgattcgtccagcgacgacgacgacgacgacgacgacgatgacgacgacgac
gacgatgacgatgtatttgtcatttgtttgaagaaggacgaggatgacgaggaggacgac
gacgaggcggaagacaaggagaacaagtcggaggacagcagcagcgagtcgaattcacag
ggttcgtcggattctgattcggactga
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