Cyclopterus lumpus (lumpfish): 117734514
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Entry
117734514 CDS
T09199
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03250
Viral life cycle - HIV-1
clum04144
Endocytosis
clum04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117734514 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117734514 (hgs)
04145 Phagocytosis
117734514 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117734514 (hgs)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
117734514 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
ELMO_ARM
FYVE_2
UIM
FYVE_CARP1-2
Cnd1
Motif
Other DBs
NCBI-GeneID:
117734514
NCBI-ProteinID:
XP_034394459
Ensembl:
ENSCLMG00005012287
LinkDB
All DBs
Position
8:complement(18616910..18626230)
Genome browser
AA seq
773 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDAQAKYAIGAIKKKLNDKNPHV
ALYALEVLESVVKNCGQTVHDEVASKQTMEELKELLKTEPNVRNKILYLIQAWAHAFRNE
PKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFELLNNHPSLSPPLRKAEGKAPTPGPV
ELPPEYLTSPLSQQSQVEMPPKKDEAALQEEEELQLAIALSQSEAEEKERARHKNSYSMY
PKADPTPVTSSAPPVSTLYTSPVNSSAPSAEDVDPELARYLNRTYWEKKQEEARKSPTPS
APAPVPLAEPLPPISQPVEIHVPVQPVSIVEQQYQNGESEENHEQFLKALQNSVTTFLNR
MKSNHMRGRSITNDSAVLSLFQSINNMHPQLLDILNQLDEKRLYYEGLQDKLAQVRDARA
ALNALRDEHREKLRRATEEAERQRHIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKE
RQMRLEQQKHTIQMRAQMPAFSLPYAQMQSLPPNVAGGVVYQPGAPPSYPGTFSPAGSVE
GSPMHNIYMNQPGQTAPPQYQAMPSAAPDPNMVNAYMYQAAGSNGQPAPPPGQAPPTTSP
PYSNYQPTPTQGYQNVVSQAQSMPPMPQPAPANGMGYMGYQPYGMQNMISALPGQDPNMP
PQQQYMPGQPPMYQQVAPPGGPQQQQQQQQQQQQQQVPQAVPGSAEAQLISFD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggcggaggcacgttcgagaggcttctggataaagccaccagtcagttgctg
ctggagactgactgggaatccatcttgcagatctgtgatctcattcgacaaggagacgca
caagctaagtatgctatcggggccattaagaagaagctgaatgacaaaaatccccacgtg
gccctctatgctcttgaggtcctggagtcagtggtgaagaactgtggccagacagtccac
gatgaggtggcgagtaaacaaactatggaggaactgaaggagttactcaagacggaaccg
aatgtcaggaacaagatcctgtacctgatccaggcctgggctcatgccttccgcaacgaa
cccaaatataaagtggtccaagacacttatcagatcatgaaagtggaaggtcatgtgttc
cccgagttcaaggagagcgatgcgatgtttgcagctgagagagcccctgactgggttgat
gctgaggagtgccaccggtgcagagtccagtttggagttatgacaagaaagcaccattgt
cgagcctgcggccagattttctgtggcaagtgttcgtcgaagtactccaccattccaaag
tttggcatagagaaggaagtgcgtgtatgtgagccctgctttgagctgcttaacaaccac
ccctccctctctcctccacttaggaaagctgaagggaaagcccccaccccaggccctgtc
gagctgcctcctgagtacctgaccagcccgctgtctcaacaatcccaggtagaaatgcct
cccaagaaagatgaggcagccctgcaggaggaagaggagctgcagctggccattgcgctt
tcccagagcgaggccgaggagaaggagcgtgcgaggcataagaactcctactcgatgtat
cccaaagcggatcccactccagtgacttcctcagctccaccagtcagcacgctctacact
tctcctgtgaactcctctgctccatcagctgaagatgtagaccctgagctggctcgctac
ctgaacagaacatattgggagaagaagcaggaagaggctcgcaagagtcccaccccctca
gctcccgcccctgtgccattggctgaaccgcttccaccaatcagtcagccagtagaaatt
catgtccctgtccagccggtcagcatagtggagcagcagtaccagaacggtgagtcggag
gagaaccacgagcagtttctgaaggctctgcagaactccgtcaccaccttcctgaaccgc
atgaagagcaaccacatgcgcgggcgcagcatcaccaacgacagtgctgtgctctcactc
ttccagtccatcaacaacatgcatccacagctgttggacatcctcaaccagctggatgag
aagcgattgtactatgaggggctgcaggacaagttggctcaggtgcgcgatgctcgggca
gccctcaacgcgctccgggacgaacacagagagaagctgcgtcgtgccacagaggaagcg
gagagacagaggcatatccagctagcacaaaaactggagatcatgaggcagaagaaacag
gagtacctggagatgcagagacagttggccatccagcgtctccaggagcaggagaaggag
aggcagatgcgtctggagcagcagaagcacacgatccagatgagggcccaaatgcctgcg
ttctctctgccctacgctcagatgcagtctttgccccccaatgtggcgggaggggtcgtg
taccagcccggtgctccacccagctatccgggtaccttcagccctgctggttctgtggag
ggttcgcctatgcacaacatctatatgaaccagcctgggcagactgcaccaccacaatac
caggccatgcccagtgctgccccagatcccaatatggtaaatgcatacatgtaccaggct
gcaggcagtaatgggcagcctgctcctccgcctggtcaggctcctcccacaactagtcca
ccctactccaactatcagcccacacccacacagggctaccagaatgtggtctcccaggcc
cagagcatgcccccgatgccccagcctgcccccgccaacggtatgggttacatgggctac
cagccatacggcatgcagaacatgatttcagcattaccaggacaggaccccaatatgccc
ccacaacagcagtacatgcctggccagccgcccatgtatcaacaggtggctccccctggc
ggcccacagcagcaacagcagcagcagcagcagcagcagcagcagcaggtccctcaggct
gtgcctggcagcgcagaagcacagctcatctccttcgattga
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integrated database retrieval system
