Cyclopterus lumpus (lumpfish): 117734541
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Entry
117734541 CDS
T09199
Symbol
gtpbp1
Name
(RefSeq) GTP-binding protein 1 isoform X1
KO
K24887
GTP-binding protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117734541 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
clum03016
]
117734541 (gtpbp1)
03012 Translation factors [BR:
clum03012
]
117734541 (gtpbp1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117734541 (gtpbp1)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117734541 (gtpbp1)
Translation factors [BR:
clum03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
117734541 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
117734541
NCBI-ProteinID:
XP_034394527
Ensembl:
ENSCLMG00005011293
LinkDB
All DBs
Position
8:complement(7557151..7570969)
Genome browser
AA seq
677 aa
AA seq
DB search
MASMAAAHEPGIRPGSIPLADALVPASIFAPDRGGCGDDAEDECFDDGDMFNGELEERGV
DFTNKLALVSPNGEQYDSLLHQLRDRMEEGCGETIYVVGMGSDGGDWGLEEKDMEASAAT
VRSMCEQVDADLITLRERNEAAGLVRDYLIRRRMGELDFLEVRVAVVGNVDAGKSTLLGV
LTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKPDSHGGSLDWTK
ICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALAL
NVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERM
CPIFQISNVSGENMDLLKMFLNLLSSRTSYHDDQPAEFQIDDTYSVPGVGTVVSGTTLRG
LIRLNDTMLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFSLKKIKRSSIRKGMVM
VSPRLCPQATWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMNRDCLRTGDKAS
VHFRFIKTPEYLHCDQRLVFREGRTKAVGTITKLLQSTNNLPSNFKPPQIKMQSTKRAPP
RKEDGTMAADDEVATIAQSATQSGEGDEEPQIKEGNKENKPKTGGGGRRRGGQRHKGKGQ
NSSTTSTAAPSSGIGGS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatggcagcggcgcacgagccaggtatacgcccgggctccataccgctggcc
gacgccttagtccccgcgagtatatttgctccggaccggggaggatgcggggacgacgcc
gaggacgagtgcttcgacgacggagacatgttcaacggcgagctcgaggagcgcggggtc
gacttcaccaacaagctggcacttgttagcccaaatggagagcagtatgactcgttactt
caccagctacgggaccgaatggaagagggatgtggagagaccatctacgtggtcgggatg
ggctcagacggtggtgactggggtctggaggagaaggacatggaggcctcagcagccaca
gtgcgctccatgtgtgagcaagtggatgccgaccttattactctccgagagcggaatgag
gctgcgggtttggttcgtgactatctgatccgacgacgtatgggtgagctggacttcctg
gaggtcagggttgcagtcgtgggtaacgtggatgctggtaagagtactctgctgggagtg
ttaacgcacggagagctggacaatggcaggggctttgcccgccaaaagctcttcagacac
aaacacgagatggagagtggcaggaccagcagtgtgggcaacgatatcctggggtttgac
caggagggacaggtggtaaacaagccagatagtcacggaggaagcctggactggaccaaa
atctgtgagaagtcctccaaggtcattaccttcatcgacctggctggccatgagaaatac
ctcaagaccactgtgtttgggatgaccggacacctgcctgacttctgcatgctcatggtg
ggcagtaacgcaggtatcgtagggatgaccaaagagcacctgggcctggctttagccctg
aatgtgcctgtgtttgtcgtggtgactaagatagacatgtgtccagccaacatcctgcaa
gagacattgaagctgctccagaggttactgaagtcccccggttgtaggaagatccccgtg
ctggttcagaacaaggacgacgtcatagtcacagcttcaaacttcagttcggagaggatg
tgccccatcttccagatctccaatgtgtctggagagaacatggaccttctcaagatgttt
ctcaacctgctctcctccaggacgtcctaccatgacgaccagcctgctgagtttcagata
gacgacacgtactctgtaccgggagtgggaacagtagtgtcaggaacaaccttacgggga
ctcatacgcctgaatgacacaatgctactagggccagaccccttgggcagcttcatcccc
attgctgtcaaatccatccaccgcaagagaatgcctgtgaaggaggtcagagggggccag
actgcctcattttccctcaaaaagatcaagcgttcgtccataagaaagggcatggtaatg
gtttccccgaggttgtgcccgcaggctacttgggagtttgaggctgagatcctggtactg
catcacccgaccacgatatcccccagataccaggccatggtccactgtggcagcataagg
cagaccgccaccatcttgtctatgaacagagactgcttacggacaggggacaaggcttcg
gtccacttccgcttcatcaaaaccccagagtacctgcactgcgaccagaggctggtgttt
agggagggacggaccaaggctgtgggcaccatcactaagctgctgcaatccaccaataat
ttaccatccaattttaaacctccacaaatcaaaatgcagtctacaaagagggcaccgccg
cgaaaagaggacggcaccatggcagccgacgatgaagtagcaacgatagcacagtcggca
acacagtcgggagagggagatgaggagcctcagataaaagagggcaacaaagagaacaag
ccaaagactggaggaggtgggaggaggagaggtggccagaggcacaaaggaaaaggccag
aacagcagcaccacctccacagcggctccctcctcaggaatcggaggttcctaa
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